XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
GTGTGTTCTGTATAACAAAAGGTATAATTATGTAAACATACATGCGAACC
CATATCTCCTTTCTTTAAGCCCTATAATGGCAGAAGGTACATCATCATAG
TCAGTATTGACTATCTGGTATTTGGGACATAGCAAACTCTTAGTCAATAT
TAGACAAGCAAAAGAAAAGAATGAATGAACAGGTTCTTGGAATGACTCCT
TTGCAGCAGGCTGAAAGAATTGGGCAGAAAAATGCAGGTTCCACTGACAA
CATGCTATTCCTCCCCACCATTAATATTTGGACAAGAACATACTCAAGGA
ACTCTTTGCTAGTAACATAAGCAACTCTCAAGTCTAAATAAGGGAGAAAA
GAAAACTCAGTTTAAAAATTAAGAGAATCATAGGAGAAATTCAAAGATCA
TAGAAAAAATTCACAATATACTTATACCATAAAATACTCATAAAGAGTAT
TTGCCAATTAAAAGGGACAGGTTTCAAATTTGGATATTAAAAACAAAATT
TATAGCCAACAAGGGATCCAGGTAAGGTGCAATGTCAAACAAGAAGTCTG
ATAGTTAATGATAAAAGGGAAAGTATTAGGGCTGGAGAAAATATGTCCTT
TCAGATTATCAGGTTTTGAATCCTAGCATCCATGTGGGAAGTGGTTTAGA
ACTACCTATAACTTTAGTTCCAGGGCTTC

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATCATTTGGGATCAATTTATGGCTATGAAC
ATCACATTTTAAAAGATATACCACAAATGAGAGACTACTGTAGCTGGGTG
GTGGTGGCAGCACATGCCTTTAATCCCAGCACTTGGGAAGCAGAGGCAGG
TGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGAC
AGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAGGAGAGAAAAAAAAGAAAAGAAAGAAAAAAA
GAAAAGAAAAGTAGAAAAGAAAGACAACTGAAGAAGGAAAGAAAGACAAC
TGTAGATTTTGTCAATATCAATAAAGAATTCCTTAATATTTTTCTTAGTG
TTTCCCTTGGTAATTTATCTGAGGCTAACAATTATTGTGCCTAAGTTTTG
CAGAATGATTAGTGTCAGAATATGTGTGACATTATCTTTATCAGTTGTTT
TATAAAGTTATATCTCATCATTAATTATCAGACCTGTCTAGTTAAATGTT
TTTTCTACTTCTAAGTGAAGTTCATTCATATAGAGACTGAAATGAATGTG
TTCAATACATTATCCTGGGACATGGTTGATTTTAATATTTAAAATTCTAA
AACATTTTTTTGTGTTGGTGCAAGAAAAACTTGAATTGGGGGGGGATTTT

Query= MSMg01no348_a19.b1 MSMg01no348_a19.b1 CHROMAT_FILE:
MSMg01no348_a19.b1 PHD_FILE: MSMg01no348_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:13 2005
         (645 letters)



>mm_chr6_101490762_101491806
          Length = 1045

 Score = 1087 bits (562), Expect = 0.0
 Identities = 616/642 (95%), Gaps = 14/642 (2%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaattcagtgtgttctgtataacaaaaggtataattatgtaaacatacatgcgaaccc-a 63
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 1036 gaattcagtgtgttcagtataacaaaaggtataattatgtaaacatacatgcgaaccctg 977

                                                                        
Query: 64   tatctcctttctttaagccctataatggcagaaggtacatcatcatagtcagtattgact 123
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 976  tatctcctttctttaagccctataatggcagaaggtacatcatcatagtcagtattgatt 917

                                                                        
Query: 124  atctggtatttgggacatagcaaactcttagtcaatattagacaagcaaaagaaaagaat 183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916  atctggtatttgggacatagcaaactcttagtcaatattagacaagcaaaagaaaagaat 857

                                                                        
Query: 184  gaatgaacaggttcttggaatgactcctttgcagcaggctgaaagaattgggcagaaaaa 243
            |||||||||||             ||||||||||||||||||||||||||||||| ||||
Sbjct: 856  gaatgaacagg-------------tcctttgcagcaggctgaaagaattgggcaggaaaa 810

                                                                        
Query: 244  tgcaggttccactgacaacatgctattcctccccaccattaatatttggacaagaacata 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809  tgcaggttccactgacaacatgctattcctccccaccattaatatttggacaagaacata 750

                                                                        
Query: 304  ctcaaggaactctttgctagtaacataagcaactctcaagtctaaataagggagaaaaga 363
            |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||
Sbjct: 749  ctcaaggaactctttgctagcaacataagcaactctcaagtctaaagaagggaggaaaga 690

                                                                        
Query: 364  aaactcagtttaaaaattaagagaatcataggagaaattcaaagatcatagaaaaaattc 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689  aaactcagtttaaaaattaagagaatcataggagaaattcaaagatcatagaaaaaattc 630

                                                                        
Query: 424  acaatatacttataccataaaatactcataaagagtatttgccaattaaaagggacaggt 483
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 629  acaatgtacttataccataaaatactcataaagagtatttgccaattaaaaggaacaggt 570

                                                                        
Query: 484  ttcaaatttggatattaaaaacaaaatttatagccaacaagggatccaggtaaggtgcaa 543
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569  atcaaatttggatattaaaaacaaaatttatagccaacaagggatccaggtaaggtgcaa 510

                                                                        
Query: 544  tgtcaaacaagaagtctgatagttaatgataaaagggaaagtattagggctggagaaaat 603
            |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 509  tgtcaaacaagaagtctgatagttaatgataagagggaaagtattggggctggagaaaat 450

                                                      
Query: 604  atgtcctttcagattatcaggttttgaatcctagcatccatg 645
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449  atgtcctttcagattatcaggttttgaatcctagcatccatg 408


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)