Query= MSMg01no349_c13.b1 MSMg01no349_c13.b1 CHROMAT_FILE:
MSMg01no349_c13.b1 PHD_FILE: MSMg01no349_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:41 2005
(669 letters)
>mm_chr6_84914073_84915143
Length = 1071
Score = 1232 bits (637), Expect = 0.0
Identities = 656/663 (98%), Gaps = 3/663 (0%)
Strand = Plus / Plus
Query: 9 ggaattcacttggttgtaccaggccgcccctgaactctgcctgcctctgcttcccatgta 68
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ggaattcacttggttg-accaggccgcccctgaactctgcctgcctctgcttcccatgta 268
Query: 69 ctaagattaaaggcgctcaccaccagcccatctatggttattctttacatgcaagagtga 128
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctaagattaaaggcgcacaccaccagcccatctatggttattctttacatgcaagagtga 328
Query: 129 gaatgttttttttctgttgtggtattcttagttatgtttattaaagtagaacaggttcaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gaatgttttttttctgttgtggtattcttagttatgtttattaaagtagaacaggttcaa 388
Query: 189 ataggttcaaatattaatcttagcaactctgtcaccagaaaactttaaaacttattgatc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ataggttcaaatattaatcttagcaactctgtcaccagaaaactttaaaacttattgatc 448
Query: 249 caataactagttctgcttttctcctaatacttcctttgtactccctatgaccatcctggt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 caataactagttctgcttttctcctaatacttcctttgtactccctatgaccatcctggt 508
Query: 309 cttctctgagtgaatcttcttccctttcaaacattcagttaaaacatgctttctctccag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cttctctgagtgaatcttcttccctttcaaacattcagttaaaacatgctttctctccag 568
Query: 369 aagtttcttgctaagctttctcatgggagggactgtaattagaaaatgaagtggaggtta 428
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aagtttcttgctaagccttctcatgggagggactgtaattagaaaatgaagtggaggtta 628
Query: 429 caaacaatgagcaccccaacttgtttgtacatttttaggtagtactacagtct--gagtt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 629 caaacaatgagcaccccaacttgtttgtacatttttaggtagtactacagtctatgagtt 688
Query: 487 ttatcctctttaaattgtgagtctcaactcccacgattttatttcttggacagaatcgag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttatcctctttaaattgtgagtctcaactcccacgattttatttcttggacagaatcgag 748
Query: 547 gtctttctgaccacttgtgaaaaaggaatctaggaagaaagagcagatggcaggaaccac 606
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 749 gtctttctgaccacttgtgaaaaaggaatctaggaaggaagagcagatggcaggaaccac 808
Query: 607 agtacttcccatccagctggggaggtgactgttctcaaatggtatttccattgtgtttaa 666
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 809 agtacttcccatccagctggggaggtgactgttctcaaatgttatttccattgtgtttaa 868
Query: 667 tgt 669
|||
Sbjct: 869 tgt 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1071
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1061
Effective search space: 699199
Effective search space used: 699199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_c13.g1 MSMg01no349_c13.g1 CHROMAT_FILE:
MSMg01no349_c13.g1 PHD_FILE: MSMg01no349_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:41 2005
(549 letters)
>mm_chr6_85092048_85092996
Length = 949
Score = 1021 bits (528), Expect = 0.0
Identities = 540/544 (99%)
Strand = Plus / Plus
Query: 1 aagaacatcctcactttctgagtgagtcccaggctagcctgacctccaggtgtgacccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaacatcctcactttctgagtgagtcccaggctagcctgacctccaggtgtgacccct 260
Query: 61 cagttagaacagctcttgcccagcaggcaggaagccctgggtttcttccccacaaccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagttagaacagctcttgcccagcaggcaggaagccctgggtttcttccccacaaccaaa 320
Query: 121 taaaccaggcttggcaggtagatcgtgtaatccctacatttagtacggggagacagagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaccaggcttggcaggtagatcgtgtaatccctacatttagtacggggagacagagaa 380
Query: 181 ttcaaaactccaggtaatccacagctacatagatttaagaaagaagacagtgaaggctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaaactccaggtaatccacagctacatagatttaagaaagaagacagtgaaggctcg 440
Query: 241 gtgcacagctctctcccctacatcagttggcggcaggcaggaggacctacaatccttggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcacagctctctcccctacatcagttggcggcaggcaggaggacctacaatccttggc 500
Query: 301 tgcctggactgcacacagaaagctgtagtcaaagcaagaggagacagaaaataaaaacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcctggactgcacacagaaagctgtagtcaaagcaagaggagacagaaaataaaaacat 560
Query: 361 tcctcagtagaaagacctgacagttatgtcaccatgggaattaactccatgttcactggt 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 tcctcagtagaaagacctgacagttatgtcgccatgggaattaactccatgttcactggt 620
Query: 421 aaagaaaagaaagggcatgcgtctaaagtgtagacagtcagtagtgaggagggaagggta 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagataagaaagggcatgcgtctaaagtgtagacagtcagtagtgaggagggaagggta 680
Query: 481 acaacagagttggaaatctctagatactgctatgaggactgaattgtgcatgatacacac 540
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 acaacagagttggaaatctctaggtactgctatgaggactgaattgtgcatgatacacaa 740
Query: 541 atga 544
||||
Sbjct: 741 atga 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
