NNNGGGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTTTCAGATTCCCTGGATCAAGCAGAAACACTTGGAC
TAAGTACTTCTTTCACACTTCAATCTCAGGAGCAAATAACATGGAAAAGA
TATTCAATTAAACCTTCCTTCCCACAATCTGTGGGGAAATGAACAAAGAA
CAGGAACTGTGGACCCACTGGTGTCCTCCAGAGAAGGCACTGGGCACGCA
ACACAGTCACAGAAAGGCTCTCTCCCTCACAGCCCGGGGGACAGGACTCC
AATACCTAACAGCTGAGAGCAGTCACCAGTCTCAATCTCCTCAGATAAGA
CAGTCTGAGGCAAGTCCTGTGAAGTAACCAAAAACTACCTGTGCACTAAA
ATATATCATAGAGTGCAATTAACTGTTCACCAGCGCGAACACCATGAAGG
AATTTTCTAGAAACCAGAAATGGTCCTAACCTAACTAACACGCTGCTTTT
CTGTATGATATACATCAGTATTTCCCCAGTTCATATACAAACTCGAATCA
CAAGGGCCTTGCAGTAGGCTGAACTCCTTTCACTGGGCGAAGGGGATGGA
CAGGGAGAGAGAATAGCTGAGTTCTAGAACCCTGGCTGCCCAGGAGGCCA
GTTTTGGCAAAGCCTGAGGAGTGAGTCCTCCCTTGGCAAGGCCAAAAGGA
TATTACTTCTGCGAAAAGGGCTGGTAA

NNNNCCTACCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCATCTACCCTTGGTC
CCCCCACCCCACCCTATTGCCCACCTCTAGCACCGCAGTGACACATTTGT
TACCAATGATAAGTCTGAACTAGTGCAGCTGATGGTTCTGTAATGCCTTC
AGTGGGTTTGGAAAGGGCCCAGTGACTTGTGTCTACACAAGCATACAAAG
CGGTCCCACCCACCTAAACTCCTCTGTGTGCTGCCTGGTGGTCTGAACCC
ACCTGAAATCCCAGCATGCACTGATCTTTTTGGTGGTGTTCTTACTTTTC
CTGCACCGCTTTCTCATGTGATTGGAGCCATACAGGTGTAGCCTTTCCTG
GTGTCCACTGCTTCCATTTTGTATGTTAGTGTTATGTAGCAATTTCTCCC
AAACTCATTGATATTTAGGAAATTAAAAGGGGGATTCACTTTTTTTTTTT
TCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTATTTTGGAACTCACTTTG
TAGACCAGGCTGGCCTTGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAA
GTGCTGGGATTAAAGGCGTGCACCACCAATCCCGGCGGGGGTTCACTTTT
TAAGATTAGGAAGCAGCCTAGTCAGGGTTTTTACCTGTTGTGAAGAAACC
TATGACCCAAAACAAGTTGGGGAAGAAAGGGTTTACTG

Query= MSMg01no351_a13.b1 MSMg01no351_a13.b1 CHROMAT_FILE:
MSMg01no351_a13.b1 PHD_FILE: MSMg01no351_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:11 2005
         (569 letters)



>mm_chr6_146449051_146450020
          Length = 970

 Score = 1048 bits (542), Expect = 0.0
 Identities = 560/566 (98%), Gaps = 1/566 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttcagattcc-ctggatcaagcagaaacacttggactaagtacttctttcaca 63
           |||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcagaaacaactggatcaagcagaaacacttggactaagtacttctttcaca 264

                                                                       
Query: 64  cttcaatctcaggagcaaataacatggaaaagatattcaattaaaccttccttcccacaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttcaatctcaggagcaaataacatggaaaagatattcaattaaaccttccttcccacaa 324

                                                                       
Query: 124 tctgtggggaaatgaacaaagaacaggaactgtggacccactggtgtcctccagagaagg 183
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 tctgtggggaaatgaacaaagaacaggaactgtggagccactggtgtcctccagagaagg 384

                                                                       
Query: 184 cactgggcacgcaacacagtcacagaaaggctctctccctcacagcccgggggacaggac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cactgggcacgcaacacagtcacagaaaggctctctccctcacagcccgggggacaggac 444

                                                                       
Query: 244 tccaatacctaacagctgagagcagtcaccagtctcaatctcctcagataagacagtctg 303
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 tccaatacctaacagctgagagcagtcaccagcctcaatctcctcagataagacagtctg 504

                                                                       
Query: 304 aggcaagtcctgtgaagtaaccaaaaactacctgtgcactaaaatatatcatagagtgca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggcaagtcctgtgaagtaaccaaaaactacctgtgcactaaaatatatcatagagtgca 564

                                                                       
Query: 364 attaactgttcaccagcgcgaacaccatgaaggaattttctagaaaccagaaatggtcct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attaactgttcaccagcgcgaacaccatgaaggaattttctagaaaccagaaatggtcct 624

                                                                       
Query: 424 aacctaactaacacgctgcttttctgtatgatatacatcagtatttccccagttcatata 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacctaactaacacgctgcttttctgtatgatatacatcagtatttccccagttcatata 684

                                                                       
Query: 484 caaactcgaatcacaagggccttgcagtaggctgaactcctttcactgggcgaaggggat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caaactcgaatcacaagggccttgcagtaggctgaactcctttcactgggcgaaggggat 744

                                     
Query: 544 ggacagggagagagaatagctgagtt 569
           ||||||||||||||||||||||||||
Sbjct: 745 ggacagggagagagaatagctgagtt 770


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 970
Length adjustment: 10
Effective length of query: 559
Effective length of database: 960
Effective search space:   536640
Effective search space used:   536640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)