Query= MSMg01no352_h13.b1 MSMg01no352_h13.b1 CHROMAT_FILE:
MSMg01no352_h13.b1 PHD_FILE: MSMg01no352_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:02 2005
(462 letters)
>mm_chr6_51124196_51125057
Length = 862
Score = 862 bits (446), Expect = 0.0
Identities = 455/458 (99%)
Strand = Plus / Minus
Query: 5 gaattcgccatctgcagacgcaagcccgcctgggtttaaacccggctctgctaccggaag 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaattcgccatcaggagacgcaagcccgcctgggtttaaacccggctctgctaccggaag 603
Query: 65 tcatttgataaatctcaggctggcctttctaatctttgcggctcctcagttttgcaaatc 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 602 tcatttgataaatctcaggctggcatttctaatctttgcggctcctcagttttgcaaatc 543
Query: 125 tttaaacaagctgtaacctccttcaaacagcgcgccagacagacaacccccagggtcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tttaaacaagctgtaacctccttcaaacagcgcgccagacagacaacccccagggtcaga 483
Query: 185 cagaatgcatctgcactccacttcctccaaggtcaggcccgcacctcttccagcaccttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cagaatgcatctgcactccacttcctccaaggtcaggcccgcacctcttccagcaccttt 423
Query: 245 ctgtctgctgattcccgtgcactcatcccgcagcccaaaacccaggaatgtctcccaccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctgtctgctgattcccgtgcactcatcccgcagcccaaaacccaggaatgtctcccaccc 363
Query: 305 tggaggcccaggtctgagcacaggagactcatcgagcccctgggggcagaccagggggag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tggaggcccaggtctgagcacaggagactcatcgagcccctgggggcagaccagggggag 303
Query: 365 agtaccctccgggcaagatcagcgaggtgggggttggtcgagtgatttatggtgcttatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agtaccctccgggcaagatcagcgaggtgggggttggtcgagtgatttatggtgcttatc 243
Query: 425 aacgttttaggaagcagaaattaacctgaggaggatta 462
||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aacgttttaggaagcagaaattaacctgaggaggatta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_h13.g1 MSMg01no352_h13.g1 CHROMAT_FILE:
MSMg01no352_h13.g1 PHD_FILE: MSMg01no352_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:02 2005
(427 letters)
>mm_chr6_50913256_50914083
Length = 828
Score = 748 bits (387), Expect = 0.0
Identities = 422/443 (95%), Gaps = 17/443 (3%)
Strand = Plus / Plus
Query: 1 acccttccatatgagtaatgggcatgttgacatgggagaccctcccggcagatgaagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccttccatatgagtaatgggcatgttgacatgggagaccctcccggcagatgaagctg 260
Query: 61 tatgtcataacggtctgtgataatgtttacttggccactagcattgatggaaggtagcca 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 tatgtcataacggtctgtgataatgttcacttggccactagcattgatggaaggtagcca 320
Query: 121 tgtgaattgagtgctcctccgtaaacagcagaggacagagacatcaccctctaattagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgaattgagtgctcctccgtaaacagcagaggacagagacatcaccctctaattagaa 380
Query: 181 ctttcaatactttcaggttaatgaaaaaaagtaaggctgttctctaaagaagctttcatg 240
|||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||
Sbjct: 381 ctttcaatactttcaggttaatgaaataaagtaaggccgtcctctaaagaagctttcatg 440
Query: 241 attcttggctccccagaaacaatctatgta-gttctgcttctgtttagcaatggatactt 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 attcttggctccccagaaacaatctatgtaagttctgcttctgtttagcaatggatactt 500
Query: 300 tctaagagaaagaaacacgtgagatctacttgggagagaaaccccaattaaaaaaaaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctaagagaaagaaacacgtgagatctacttgggagagaaaccccaattaaaaaaaaaaa 560
Query: 360 a---------------acagtgatgtgctttgtgaaaaaaaatggcttaaattaaacctc 404
| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 attaaaaaaaaaaaaaacagtgatgtgctttgtgaaaaaaa-tggcttaaattaaacctc 619
Query: 405 tttgattggaagtaaaatttcca 427
|||||||||||||||||||||||
Sbjct: 620 tttgattggaagtaaaatttcca 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 828
Length adjustment: 9
Effective length of query: 418
Effective length of database: 819
Effective search space: 342342
Effective search space used: 342342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
