Query= MSMg01no353_l02.b1 MSMg01no353_l02.b1 CHROMAT_FILE:
MSMg01no353_l02.b1 PHD_FILE: MSMg01no353_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:38 2005
(451 letters)
>mm_chr6_68655374_68656227
Length = 854
Score = 729 bits (377), Expect = 0.0
Identities = 432/451 (95%), Gaps = 3/451 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttgtccacatgaatatgaaagtatatttattctcttggtaataatgggatgt 63
||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 204 ggaattctttgtccatatgaatatgaaaatatttttattctcttgggaataatgggatgc 263
Query: 64 accctttgctcagtttgggatcatctacttaaacacttttcttgtacttgctaatattta 123
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 264 accctttgctcagtttgggatcatctacttaaagacttttcttgtacttgctaatattta 323
Query: 124 ccacaattcttcagcatacacgtttgactagtgaagatatccttgaatactataacagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccacaattcttcagcatacacgtttgactagtgaagatatccttgaatactataacagaa 383
Query: 184 aacactgctactgggtactctggatgttacatttggttcctacgattggataaataatga 243
||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 384 aacactgctactgggtactctggatgttatacttggttcctacaattggataaataatga 443
Query: 244 atcccaacaaaattaagca--gtgtaaaaggacatccctagtataccagtcaacactgat 301
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcccaacaaaattaagcacagtgtaaaaggacatccctagtataccagtcaacactgat 503
Query: 302 cactgtgttatggatatgttcccattgtagtctttaattgctgagaggaagccctcatga 361
|||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||
Sbjct: 504 cactgtgttatggatatgtttccattggagtctttaattgctgaaaggaagccctcatga 563
Query: 362 tcatcagctgtcctaccagagactattacccactgtgtaaccagccaattaataagtaca 421
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 564 tcatcagctgtcctgccagagactattactcactgtgtaaccagccaattaataagtaca 623
Query: 422 tggg-aggggggtagattttgttttattcac 451
|||| |||||| ||||||||||||| |||||
Sbjct: 624 tggggagggggatagattttgttttgttcac 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 854
Length adjustment: 10
Effective length of query: 441
Effective length of database: 844
Effective search space: 372204
Effective search space used: 372204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_l02.g1 MSMg01no353_l02.g1 CHROMAT_FILE:
MSMg01no353_l02.g1 PHD_FILE: MSMg01no353_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:38 2005
(447 letters)
>mm_chr6_68823817_68824669
Length = 853
Score = 731 bits (378), Expect = 0.0
Identities = 433/454 (95%), Gaps = 12/454 (2%)
Strand = Plus / Minus
Query: 1 tgcctcctcctagaccacaaacagaattcctagaattacctattgagtaatttgattgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tgcctcctcctagaccacaaacagaattcctagaattacctattgagtaatttgattgca 592
Query: 61 tggattctgtactattgtacagtgtctgtcctgtacttcactttgattctgaataaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tggattctgtactattgtacagtgtctgtcctgtacttcactttgattctgaataaaata 532
Query: 121 cttaacatattgttataacatagactgcagccagacattcatctattaaaagaaacaatg 180
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 531 cttaacatattgttataacatagaccacagtcagacattcatctattaaaagaaacaatg 472
Query: 181 ctatattcttatttttatgtgg-taa-acatattaattaatttccccctaagaatcctgt 238
|||||||||||||||||||||| ||| || ||||||||| ||||| |||||||||||||
Sbjct: 471 ctatattcttatttttatgtggttaagac--attaattaacttccctctaagaatcctgt 414
Query: 239 ataacaagtaaaattcctcattttgcc-tctgctctatggcttt-t----tttttctttt 292
|||||||||||||||||||||||| || |||||||||||||||| | ||||||||||
Sbjct: 413 ataacaagtaaaattcctcatttt-ccatctgctctatggctttatggactttttctttt 355
Query: 293 tactgatctttcttaa-ctttctgatgatcccttaaaaggagtatatacatgacatacat 351
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 354 tactgatctttcttaaactttctgatgatcccttaaaaggagtatatacgtgacataaat 295
Query: 352 atggccccaagcatcagagttcttatcattccatgaaaataactatatttggctttttac 411
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atggccccaagcatcagagtccttatcattccatgaaaataactatatttggctttttac 235
Query: 412 tgcccttactcataaacaatactggactacctga 445
|||||||||||| |||||||||||||||||||||
Sbjct: 234 tgcccttactcagaaacaatactggactacctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 853
Length adjustment: 10
Effective length of query: 437
Effective length of database: 843
Effective search space: 368391
Effective search space used: 368391
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
