XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CACCAATGAGATATATTCCCAGGACCTAAATGGTATATAGTTTTATTATT
TGTTGTATTAGTGTTTGTGCACTATGAATATGTGTGGTAACATATATAAA
AGCACATGTAGAAGTTAGAGAACACATTTAAGGTGTCCATTCTCTCCTTC
TGCATTTTCATGGAGTCTGGTGATCAAACAGACATCATTGGACTTAAGCA
GCAAGCCCCTTTACCTGCTGAACCATATTGTACAATCTTTGAACCATATT
GTATACTCTTAAATGGTTTTGATGGCTCCAAATGTTCTTATTTCAGATAG
CAGCAAGGCTTTGATATTCTAATAATAAGTTTTTGATCCATGATTACCTA
TGTGTCATTATTAACAAAGCTTGTCTAATATCCTAGTTAATACATCCAAA
AACCTTAGAAATTTCTTAGTGTATGCAAAGTTACCACCTTAAGTATACCA
AATGATAATGCTAATAATTATTAAAAATATCTTACATGGTTAAAGAAACA
CACTCACACGCTCACTGGCTTGTTTTTTTTATATTTTGGAAGGGGGAATA
ATTTTGGTGTTTTTCAAACCTTCTGGGTCCCATTTAACTTGGGTAAAAGG
TCCCCAAAAAGTTTTTATACCTTTTCTACTTAAGGGCCGGTATTCTCCTT
TCTCCTATTTCATTTTTTTATTTCTTTGAAAACTTATTTGTCCCTCACTA
CCATTTGATGGTTCCCTACCTATTCAG

ATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGA
AGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACAC
TCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCC
GTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGC
AATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGG
ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC
TGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG
GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA
TTGAAATTCCTAGCCCAATGGAGGGACCTGGAAGGGTTCTTCCTGAATGG
AGGAAAACCTTTTCCAAAGGAATTCCCCCAAATGTATTCCCTGGAAAAGG
GGAAATTAACCCCCACCCCAGGAAACCCCAGAATATAAAATAAAATTTTC
TATAACAACTTGAAACCCCAAAAAAAAAAAAAACAGAAGGGGGGGGCCTT
TGCCCCCCCCCTTTAATAGGGGAAAAAAAAACCCTTGGAA

Query= MSMg01no357_j18.b1 MSMg01no357_j18.b1 CHROMAT_FILE:
MSMg01no357_j18.b1 PHD_FILE: MSMg01no357_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:39 2005
         (452 letters)



>mm_chr6_111229524_111230375
          Length = 852

 Score =  868 bits (449), Expect = 0.0
 Identities = 449/449 (100%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccaccaatgagatatattcccaggacctaaatggtatatagttttattatttgt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaccaatgagatatattcccaggacctaaatggtatatagttttattatttgt 263

                                                                       
Query: 64  tgtattagtgtttgtgcactatgaatatgtgtggtaacatatataaaagcacatgtagaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtattagtgtttgtgcactatgaatatgtgtggtaacatatataaaagcacatgtagaa 323

                                                                       
Query: 124 gttagagaacacatttaaggtgtccattctctccttctgcattttcatggagtctggtga 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttagagaacacatttaaggtgtccattctctccttctgcattttcatggagtctggtga 383

                                                                       
Query: 184 tcaaacagacatcattggacttaagcagcaagcccctttacctgctgaaccatattgtac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcaaacagacatcattggacttaagcagcaagcccctttacctgctgaaccatattgtac 443

                                                                       
Query: 244 aatctttgaaccatattgtatactcttaaatggttttgatggctccaaatgttcttattt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatctttgaaccatattgtatactcttaaatggttttgatggctccaaatgttcttattt 503

                                                                       
Query: 304 cagatagcagcaaggctttgatattctaataataagtttttgatccatgattacctatgt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagatagcagcaaggctttgatattctaataataagtttttgatccatgattacctatgt 563

                                                                       
Query: 364 gtcattattaacaaagcttgtctaatatcctagttaatacatccaaaaaccttagaaatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtcattattaacaaagcttgtctaatatcctagttaatacatccaaaaaccttagaaatt 623

                                        
Query: 424 tcttagtgtatgcaaagttaccaccttaa 452
           |||||||||||||||||||||||||||||
Sbjct: 624 tcttagtgtatgcaaagttaccaccttaa 652


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space:   372164
Effective search space used:   372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)