Query= MSMg01no358_k05.b1 MSMg01no358_k05.b1 CHROMAT_FILE:
MSMg01no358_k05.b1 PHD_FILE: MSMg01no358_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:57 2005
(547 letters)
>mm_chr6_79215256_79216203
Length = 948
Score = 1021 bits (528), Expect = 0.0
Identities = 540/544 (99%), Gaps = 1/544 (0%)
Strand = Plus / Minus
Query: 5 gaattctcttagaaataacataaaaacgtaagacatcactactaaaatttttgacttgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gaattctcttagaaataacataaaaacgtaagacatcactactaaaatttttgacttgtt 556
Query: 65 tatattaattggataaaaatttgtgacaacactaaaaatgagaaaacaagaaataattta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tatattaattggataaaaatttgtgacaacactaaaaatgagaaaacaagaaataattta 496
Query: 125 aaataagataatgctttgaaatttcaatgtaaatatgtcattaatagaattttcaagtct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaataagataatgctttgaaatttcaatgtaaatatgtcattaatagaattttcaagtct 436
Query: 185 ctcaacaggttttactattccccaaacttaa-tttgaattgtacagtatatgacttaatt 243
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 435 ctcaacaggttttactattccccaaacttaattttgaattgtacagtatatgacttaatt 376
Query: 244 ttgagttgtacagatgtattcacaaaaggttcaacacattaatttgatattgatatttgt 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttgagttgtacagttgtattcacaaaaggttcaacacattaatttgatattgatatttgt 316
Query: 304 cttaaagttccttgttatcctattaatgtccaatgttgaaagatggatttttaaatttta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cttaaagttccttgttatcctattaatgtccaatgttgaaagatggatttttaaatttta 256
Query: 364 ctttaatctgtcacattatataattttctccaatcacagtgctttgtcctctgtggggag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctttaatctgtcacattatataattttctccaatcacagtgctttgtcctctgtggggag 196
Query: 424 ccgccctcacattcgccgttacaagatggcgctgacatcctgtgttctaagtggtaaaca 483
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 195 ccgccctcacattcgctgttacaagatggcgctgacatcatgtgttctaagtggtaaaca 136
Query: 484 aataatctgcgcatgtgccaagggtagttctccactccatgtgctctgccttccccgtga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 aataatctgcgcatgtgccaagggtagttctccactccatgtgctctgccttccccgtga 76
Query: 544 cgac 547
||||
Sbjct: 75 cgac 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 948
Length adjustment: 10
Effective length of query: 537
Effective length of database: 938
Effective search space: 503706
Effective search space used: 503706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_k05.g1 MSMg01no358_k05.g1 CHROMAT_FILE:
MSMg01no358_k05.g1 PHD_FILE: MSMg01no358_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:57 2005
(536 letters)
>mm_chr6_79191628_79192565
Length = 938
Score = 975 bits (504), Expect = 0.0
Identities = 531/544 (97%), Gaps = 8/544 (1%)
Strand = Plus / Plus
Query: 1 cttaaagttgtaagtctgcatactaaatcttttagaataataaaataaaaggagtataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cttaaagttgtaagtctgcatactaaatcttttagaataataaaataaaaggagtataaa 254
Query: 61 aatacatcgcaggagtgcaaaaaatatctgacagactgagataaatattcttttatggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatacatcgcaggagtgcaaaaaatatctgacagactgagataaatattcttttatggag 314
Query: 121 tcaggccgaaaaagagcaaagtgaactcagtgagactgatatggggaatttcaatgatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcaggccgaaaaagagcaaagtgaactcagtgagactgatatggggaatttcaatgatat 374
Query: 181 caaatgaaaaggataagc------aaaaaaaaaaaaaaaaaggatggaataaatagtagc 234
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 375 caaatgaaaaggataagcaaaaaaaaaaaaaaaaaaaaaaaggatggaataaatagtagc 434
Query: 235 tagagagctttg--aaagaaatgcattacccaagattcttatgtctgaccaagttactgt 292
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tagagagctttgaaaaaaaaatgcattacccaagattcttatgtctgaccaagttactgt 494
Query: 293 ctgggttatagaacaaggaaggtatatttttagctatagaaagagtctgaaagcattgta 352
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 495 ctgggttatagaacaaggaaggtgtatttttagctctagaaagagtctgaaagcattgta 554
Query: 353 ttcatgcacatttactaaaatgtactaattcaactcaaagtagaaaataaatttatgtta 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttcatgcacatttactaaaatgtactaattcaactcaaagtagaaaataaatttatgtta 614
Query: 413 aaagatattccaaaactagattcacattttcacaccaaaattacaagaaaagatagctgg 472
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 615 aaagatattccaaaactagactcacattttcacaccaaaattacaagaaaagatatctgg 674
Query: 473 aataaaaacataaagtttgttgaattttttaccatcccatttgttaacacttatattata 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aataaaaacataaagtttgttgaattttttaccatcccatttgttaacacttatattata 734
Query: 533 aaat 536
||||
Sbjct: 735 aaat 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 938
Length adjustment: 10
Effective length of query: 526
Effective length of database: 928
Effective search space: 488128
Effective search space used: 488128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
