Query= MSMg01no359_f19.b1 MSMg01no359_f19.b1 CHROMAT_FILE:
MSMg01no359_f19.b1 PHD_FILE: MSMg01no359_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:50 2005
(427 letters)
>mm_chr6_115401270_115402098
Length = 829
Score = 787 bits (407), Expect = 0.0
Identities = 419/425 (98%), Gaps = 6/425 (1%)
Strand = Plus / Minus
Query: 5 gaattcc-aatatttctgtcttttttcttcaagtttgtgtgttctctgaagtcaagaata 63
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattccaaatatttctgtcttttttcttcaagtttgtgtgttctctgaagtcaagaata 455
Query: 64 atatagcaaaggcatggtaaagaacaccaccaacaaaaatacatgaaccagaattctaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atatagcaaaggcatggtaaagaacaccaccaacaaaaatacatgaaccagaattctaat 395
Query: 124 atcgcttctttgttcttatactctgaacattagatatacccagcattttttaaagcagta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atcgcttctttgttcttatactctgaacattagatatacccagcattttttaaagcagta 335
Query: 184 ataaccaacacatgtgattataattctgcttttaagctgttttt-aaaaaatatttcaaa 242
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 334 ataaccaacacatgtgattataattctgcttttaagctgtttttaaaaaaatatttcaaa 275
Query: 243 gcaacatatatatcatgataaccattatatttgcatcaagacatcagtttttccaaagat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcaacatatatatcatgataaccattatatttgcatcaagacatcagtttttccaaagat 215
Query: 303 ccttttcttaacacacacacacacacacacacacacacacacacacacacacacacacac 362
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ccttttctta----acacacacacacacacacacacacacacacacacacacacacacac 159
Query: 363 acacacacatacacgaataagagtttatagggccaggacactgggttgaaggcctgttga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 acacacacatacacgaataagagtttatagggccaggacactgggttgaaggcctgttga 99
Query: 423 acttc 427
|||||
Sbjct: 98 acttc 94
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 829
Length adjustment: 9
Effective length of query: 418
Effective length of database: 820
Effective search space: 342760
Effective search space used: 342760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_f19.g1 MSMg01no359_f19.g1 CHROMAT_FILE:
MSMg01no359_f19.g1 PHD_FILE: MSMg01no359_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:50 2005
(330 letters)
>mm_chr6_115266817_115267549
Length = 733
Score = 590 bits (305), Expect = e-173
Identities = 325/333 (97%), Gaps = 3/333 (0%)
Strand = Plus / Plus
Query: 1 tttctactttctctccgaatcactccgtgaacccggagtattttcttgacttcattcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctactttctctccgaatcactccgtgaacccggagtattttcttgacttcattcttt 260
Query: 61 ggtgaccacagttattctgactctgttgctttttcaacctcaagtgggtttctggcattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgaccacagttattctgactctgttgctttttcaacctcaagtgggtttctggcattt 320
Query: 121 ctagttcctaattcagttctgcaaaccatcagcataatttaaccgacacgagttagcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ctagttcctaattcagttctgcaaaccatcagcataatttaaccgacacgagttagcggg 380
Query: 181 ggtgagaaactatgtagacacgtttatccatatcagcttttttttttttt---aagaata 237
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 ggtgagaaactatgcagacacgtttatccatatcagctttttttttttttttaaagaata 440
Query: 238 gcctgatagaagacgtttattatgatttctagttgaagccagtgtactgagctaataatc 297
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 gcctgatagaagacgttttttatgatttctagttgaagccagtgtagtgagctaataatc 500
Query: 298 ggaaagtgtgcatgttcctttcagaaagagcag 330
|||||||| ||||||||||||||||||||||||
Sbjct: 501 ggaaagtgcgcatgttcctttcagaaagagcag 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 733
Length adjustment: 9
Effective length of query: 321
Effective length of database: 724
Effective search space: 232404
Effective search space used: 232404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
