Query= MSMg01no359_l07.b1 MSMg01no359_l07.b1 CHROMAT_FILE:
MSMg01no359_l07.b1 PHD_FILE: MSMg01no359_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:15 2005
(368 letters)
>mm_chr6_126714527_126715294
Length = 768
Score = 609 bits (315), Expect = e-179
Identities = 353/373 (94%), Gaps = 13/373 (3%)
Strand = Plus / Plus
Query: 4 ggaattcttctctgctttgttcactggcgtatccatcttcagcaccgaagcctgcctggc 63
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 193 ggaattcttctctgctttgttcactggcgtatccgtcttcagcaccgaagcctgcctggc 252
Query: 64 atttatcaggcccacagaatttactgaatagatgaatgataattagctgcacaaatgtta 123
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 253 atttatcaggcccacagaatttactgaataaatgaatgataattagctgcacaaatgtta 312
Query: 124 tttaccctcgtcattactttacatcttcaactcatatgctcgtcagacttcgtagcttga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tttaccctcgtcattactttacatcttcaactcatatgctcgtcagacttcgtagcttga 372
Query: 184 ctttcctagggctgagcagttctctcagaggcttccttgccttcactctccctggctcca 243
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 373 ctttcctagggctgagcagt-ctctcagaggcttcctcgccttcactctccctggctcca 431
Query: 244 tcatccccagtgctggg------------gggaggggggtgctcagccattgctctccta 291
||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 432 tcatccccagtgctgggcgggggggggggggggggggggtgctcagccattgctctccta 491
Query: 292 ctcattgcctcttctccacctccccttctctttctggaagtttcctggctcctgggttac 351
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctcatcgcctcttctcaacctccccttctctttctggaagtttcctggctcctgggttac 551
Query: 352 tctaggtatctcc 364
|||||| ||||||
Sbjct: 552 tctagggatctcc 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_l07.g1 MSMg01no359_l07.g1 CHROMAT_FILE:
MSMg01no359_l07.g1 PHD_FILE: MSMg01no359_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:15 2005
(386 letters)
>mm_chr6_126889662_126890447
Length = 786
Score = 723 bits (374), Expect = 0.0
Identities = 383/386 (99%)
Strand = Plus / Minus
Query: 1 tctgggtgtgcctacaccctgtcagagcaacatgcaaaacgacaagcctagttgaccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tctgggtgtgcctacaccctgtcagagcaacatgcaaaacgacaagcctagttgaccaca 527
Query: 61 aacactgaactggcaatggcaagctgcactccagcactttagatggcccctagaagactc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 526 aacactgaactggcaatggcaagctgcactccagcactttagatggcccttagaagactc 467
Query: 121 cttctgttctttaagtctgtaccagataccgtcattgggtcctctacactgaaggggctt 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 466 cttctgttctttaagtctgtaccagataccgtcattgggtcctccacactgaaggggctt 407
Query: 181 cttcgctgtgggctcgaactcacctctttcatcagacaccaaagcacacttggagctgtc 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 406 cttcgctgtgggctcgaactcacctctctcatcagacaccaaagcacacttggagctgtc 347
Query: 241 aacgcagaactgcccaaataagtcagctgacttcttgcttttttttttttaacctccaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aacgcagaactgcccaaataagtcagctgacttcttgcttttttttttttaacctccaat 287
Query: 301 agatccactttggcagattcggaactcatgtttctctttcctcaagcgccaaggaaaacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agatccactttggcagattcggaactcatgtttctctttcctcaagcgccaaggaaaacg 227
Query: 361 cctatccaagaccccctttgttccag 386
||||||||||||||||||||||||||
Sbjct: 226 cctatccaagaccccctttgttccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
