Query= MSMg01no360_i08.b1 MSMg01no360_i08.b1 CHROMAT_FILE:
MSMg01no360_i08.b1 PHD_FILE: MSMg01no360_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:17 2005
(382 letters)
>mm_chr6_52246087_52246868
Length = 782
Score = 692 bits (358), Expect = 0.0
Identities = 376/382 (98%)
Strand = Plus / Plus
Query: 1 caatcataagcaagtgctctattgtggttacaaccccagtcccttgctctctttactgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatcataagcaagtgctctattgtggttacaaccccagtcccttgctctctttactgat 260
Query: 61 ttgttcacaaggcacatacagcttaaggataccacatccttatcagtactggaaactcag 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ttgttcacaaggcacatacagcttaaggataccacattcttatcagtactggaaactcag 320
Query: 121 cttccacaggccaagaactttgtcttatatgttgtactagtgagatttattcctagtgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttccacaggccaagaactttgtcttatatgttgtactagtgagatttattcctagtgac 380
Query: 181 agatagcctaaagtgagggtgtgtggtgttattcattgggagacagtacacaggatacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatagcctaaagtgagggtgtgtggtgttattcattgggagacagtacacaggatacac 440
Query: 241 tttgcaaggatctgtttttgatttacagatccaaaaatcagtcatatggagacagaaaat 300
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgcaaggatctgggtttgatttacagatccaaaaatcagtcatatggagacagaaaat 500
Query: 301 gactctaaaatcatcgtggtgccttagttacctctatattgctacgaacagataccatga 360
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 501 gactctaaaatcatcgtggtgccttagttacctctatattactatgaagagataccatga 560
Query: 361 ccgaggcaatttgttaaagaaa 382
||||||||||||||||||||||
Sbjct: 561 ccgaggcaatttgttaaagaaa 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_i08.g1 MSMg01no360_i08.g1 CHROMAT_FILE:
MSMg01no360_i08.g1 PHD_FILE: MSMg01no360_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:17 2005
(323 letters)
>mm_chr6_52449589_52450310
Length = 722
Score = 576 bits (298), Expect = e-169
Identities = 316/322 (98%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 1 caaattgcctttcaaagtacagtgaaacccttttacaatgaattcctgaagggacagcag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 caaattgcctttcaaagtacagtgaaacccttttacagtgaattcctgaagggacagcag 386
Query: 61 cagcaggagggtcagcctcagccatcactgcatgagcaaacactgtattcactgttgtgg 120
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 cagcaggagggtctgcctcagccatcactgcatgagc-aacactgtattcactgttgtgg 327
Query: 121 gattgatggggaagacacagactttagagtctgatagctcttgagtcaggtggcattgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 326 gattgatggggaagacacagactttagagtctgatagctcttgagtcaggtggcattatt 267
Query: 181 tgacaaaatgtctatagctcggagcaaaggaaaaattaaaccttgctaatctcgtgatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgacaaaatgtctatagctcggagcaaaggaaaaattaaaccttgctaatctcgtgatgg 207
Query: 241 aaagaatcctttcaggggttgaggacatggccttcaggagagtgcaggctgcacaagcat 300
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aaagaaaccattcaggggttgaggacatggccttcaggagagtgcaggctgcacaagcat 147
Query: 301 gagtagctgagttcaaatcctg 322
||||||||||||||||||||||
Sbjct: 146 gagtagctgagttcaaatcctg 125
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
