Query= MSMg01no361_e19.b1 MSMg01no361_e19.b1 CHROMAT_FILE:
MSMg01no361_e19.b1 PHD_FILE: MSMg01no361_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:18 2005
(647 letters)
>mm_chr6_76848965_76850011
Length = 1047
Score = 1168 bits (604), Expect = 0.0
Identities = 631/643 (98%), Gaps = 9/643 (1%)
Strand = Plus / Plus
Query: 5 gaattcttctctggcatcctatgtacaatattgccaatctacattgccattgcaagacta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttctctggcatcctatgtacaatattgccaatctacattgccattgcaagacta 264
Query: 65 ctaaggcttccacttctcatgaagtcattccaaggcccttgattccatgagttttttctt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 265 ctaaggcttccacttctcatgaagtcattccaaggcccttgattccatgagtttgttctt 324
Query: 125 cacacccaagcaagtttacagtctaaatgtagttcctgagatactaaattctggaaattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacacccaagcaagtttacagtctaaatgtagttcctgagatactaaattctggaaattt 384
Query: 185 atattacattagggtttagagaaatttttactgaataaactaaacttagcttaggagctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atattacattagggtttagagaaatttttactgaataaactaaacttagcttaggagctc 444
Query: 245 acaggggtacttcttagttccttgagcacttactgtgttagcttccaagctgtcacttgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acaggggtacttcttagttccttgagcacttactgtgttagcttccaagctgtcacttgg 504
Query: 305 gaaatgtttagagttcccacaggtggacattccccaagattcaagtaaggagtttttttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaatgtttagagttcccacaggtggacattccccaagattcaagtaaggagtttttttt 564
Query: 365 tttgttttgttttgtttttgtttttttttctcctataaggttcatagcttagtactcact 424
|| ||| ||| ||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 565 tt-gtt--gtt--gtt---gtttttttt-ctcctataaggttcatagcttagtactcact 615
Query: 425 attttttcactcatcaatacttatccatgatatgtattattcctaaaatattgcataagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 attttttcactcatcaatacttatccatgatatgtattattcctaaaatattgcataagt 675
Query: 485 aaccttgaactttggagtgttcaatgagatcatttctatctagcatttagtagatatgta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aaccttgaactttggagtgttcaatgagatcatttctatctagcatttagtagatatgta 735
Query: 545 tctgttaatgccaaacaatttaattctaaaaacataaaacttctaagcaaaccactgtct 604
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tctgctaatgccaaacaatttaattctaaaaacataaaacttctaagcaaaccactgtct 795
Query: 605 cnaaacagcacagccactatcatgatgctatttttccttacat 647
| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 caaaacagcacagccactatcatgatgctatttttccttacat 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_e19.g1 MSMg01no361_e19.g1 CHROMAT_FILE:
MSMg01no361_e19.g1 PHD_FILE: MSMg01no361_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:18 2005
(481 letters)
>mm_chr6_76968484_76969364
Length = 881
Score = 797 bits (412), Expect = 0.0
Identities = 429/436 (98%), Gaps = 3/436 (0%)
Strand = Plus / Minus
Query: 49 agtctaacttcttgagttctttgtatatattggatattagccctctatcggatttaggat 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 agtctaacttcttgagttctttgtatatattggatattagccctctatcggatttaggat 822
Query: 109 tggtaaagatcttttcccaacctattggttgcctttttttttt---aattgacagagtcc 165
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 821 tggtaaagatcttttcccaacctattggttgccttttttttttttaaattgacagagtcc 762
Query: 166 tttgccttacagaagctttgcaaattttatgaggtcccatttgtcaattcttgatcttat 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tttgccttacagaagctttgcaaattttatgaggtcccatttgtcaattcttgatcttat 702
Query: 226 agcacaagccattggtgttcatcctctcatctttatttaataaattccttggtgtactta 285
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 701 agcacaagccattggtgttcatcctttcatctttatttaataaattccttggtgtactta 642
Query: 286 ataattccttggtgtacttaataattttgagtatttagttttatatgtagtcatttgttc 345
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agaattccttggtgtacttaataattttgagtatttagttttatatgtagtcatttgttc 582
Query: 346 ctttttaccaaagccccactcattgcaaaaacattcactataaatatgttgttggccata 405
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctttttaccaaagcccaactcattgcaaaaacattcactataaatatgttgttggccata 522
Query: 406 acttgtggagatgtccttctacttacctcagtaagtttctctcattttagattaccctat 465
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 521 acttgtggagatgtccttctacttacctcagaaagtttctctcattttagattaccctat 462
Query: 466 tgcttcttattgaatt 481
||||||||||||||||
Sbjct: 461 tgcttcttattgaatt 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
