ACTTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGGGGTCTTCTAGGCTCAAAGCTAACTGACCTGCAGCTCTTG
TCACCCCAACGCAGCTGTGACTCAGGGACATTGTGCAGCTTGGGATAGGT
GCCCACACGCTATTTACACAGTGGCAACTTGCATTCGAAAAGGGAGAGGC
TCTGGTTTGCCTTTGGAAGTCAAACCCAAGGATACCCCTCCCCCACCAAA
TGGCAAGGGCGACTTGCAAGCAGTTAGTATTTATTTACGAGAGTACACAG
ATCTTTAACGTGCCCCTTAAACGCGGTCCTTAAGGATGACCCTCACCTCT
TCGTTCTCCACAGCACGAGCCCTAGCCCTCTGTCAGCATGTTGCTCTGAG
TAAAGGGATATTAATGTTTCAGCACCTGTCAGAGGTGAAAGGGGCTCAGT
GGCCCCTGCTATAGATGTCACAAGTAACAAACAAAAAGAGTATAAGTGAC
TGATGCGTGTGATGACATGTACCAGTCATTCCAACACTTTGGAGGCTGAT
GCACGCTGATTTTGAATTGCATGCCATTCTTAAGTCTTATTCAGATCATA
TCTCACAAGCCATTACCCACTTTTTAGTATGAGCAAGGAATGGGCCCACA
TGTCTCTGCTCCTGCCTGAATGGGAATTCTTCGTGGGCTCTGTACCCTAA
AGACCCAAAAATATTTGCGGCCTATCCCCCGTCTCTTCTGCTAATCC

CCCGAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCATGAAACACCCAGACATTCAAT
ACTAAGAGTGATGACTCAGCACAGGCAGAAGCTGAGGCTCGGAGGGATGG
ATGAAGCGATCCCCCACACTCCTTAGACAAAGCTTCAGTCTAGTTTTCTC
CAGAAAATCCTCTGGCTATTGTGCTTTGCTGAAGCTCCGTGCCTGCCTGC
CCAGTGAGCCCCAGATATGTGCTTTCAGTCTCAACATTCATCACAGCTCT
GTGAGTCAATGCCTTCGGATGTGAGGAGAGAGGAATTGCAACCTGTCGGA
CAAGGGCACCCTGGACCCAGAACAGTCCTTAAGTGCTATTGAAAGTACAG
CTTCATGTTCAGGTATGACTTAGAAATCTGTTGGATGTGAGTTTCTTAGG
AAGGAACATGGCCTTGGATAAGGTGAGTATCTCAAGGTGAGAAAAGTTCC
TGAAGGAACTGGCAGATAAAGGTCACATGTCACTCGGACTCCCAGCAGCC
CAGAGAAGTCCTTCTTTGACAGATGCTTATCCCAATGGCCACTTTCTCAA
CTACTTGTTGAGTTTCTTTATACTCTGCCAATGGAACATTTCTTTCCCTA
TCTACTAATATCTGCTTTGTTTTATTTGCTTGGTGACTCATATTTCTGCA
TTTCCACCTGTCCTAAAATTTCTTCTCTTACAGTTTCTTAACG

Query= MSMg01no361_m11.b1 MSMg01no361_m11.b1 CHROMAT_FILE:
MSMg01no361_m11.b1 PHD_FILE: MSMg01no361_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:55 2005
         (397 letters)



>mm_chr6_53513665_53514461
          Length = 797

 Score =  745 bits (385), Expect = 0.0
 Identities = 394/397 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggctcaaagctaactgacctgcagctcttgtcaccccaacgcagctgtgactcagggac 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 aggctcaaagctaactgacctgcagctcctgtcaccccaacgcagctgtgactcagggac 260

                                                                       
Query: 61  attgtgcagcttgggataggtgcccacacgctatttacacagtggcaacttgcattcgaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 attgtgcagcttgggataggtgcccacacgctatttacacagtggcaacttgcatttgaa 320

                                                                       
Query: 121 aagggagaggctctggtttgcctttggaagtcaaacccaaggatacccctcccccaccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagggagaggctctggtttgcctttggaagtcaaacccaaggatacccctcccccaccaa 380

                                                                       
Query: 181 atggcaagggcgacttgcaagcagttagtatttatttacgagagtacacagatctttaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggcaagggcgacttgcaagcagttagtatttatttacgagagtacacagatctttaac 440

                                                                       
Query: 241 gtgccccttaaacgcggtccttaaggatgaccctcacctcttcgttctccacagcacgag 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 gtgccccttaaacgcggtccttaaggatgaccctcacctcttcgttctccacagcatgag 500

                                                                       
Query: 301 ccctagccctctgtcagcatgttgctctgagtaaagggatattaatgtttcagcacctgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctagccctctgtcagcatgttgctctgagtaaagggatattaatgtttcagcacctgt 560

                                                
Query: 361 cagaggtgaaaggggctcagtggcccctgctatagat 397
           |||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaggtgaaaggggctcagtggcccctgctatagat 597


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space:   305744
Effective search space used:   305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no361_m11.g1 MSMg01no361_m11.g1 CHROMAT_FILE:
MSMg01no361_m11.g1 PHD_FILE: MSMg01no361_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:55 2005
         (436 letters)



>mm_chr6_53689322_53690157
          Length = 836

 Score =  835 bits (432), Expect = 0.0
 Identities = 435/436 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catgaaacacccagacattcaatactaagagtgatgactcagcacaggcagaagctgagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 catgaaacacccagacattcaatactaagagtgatgactcagcacaggcagaagctgagg 494

                                                                       
Query: 61  ctcggagggatggatgaagcgatcccccacactccttagacaaagcttcagtctagtttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctcggagggatggatgaagcgatcccccacactccttagacaaagcttcagtctagtttt 434

                                                                       
Query: 121 ctccagaaaatcctctggctattgtgctttgctgaagctccgtgcctgcctgcccagtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctccagaaaatcctctggctattgtgctttgctgaagctccgtgcctgcctgcccagtga 374

                                                                       
Query: 181 gccccagatatgtgctttcagtctcaacattcatcacagctctgtgagtcaatgccttcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gccccagatatgtgctttcagtctcaacattcatcacagctctgtgagtcaatgccttcg 314

                                                                       
Query: 241 gatgtgaggagagaggaattgcaacctgtcggacaagggcaccctggacccagaacagtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gatgtgaggagagaggaattgcaacctgtcggacaagggcaccctggacccagaacagtc 254

                                                                       
Query: 301 cttaagtgctattgaaagtacagcttcatgttcaggtatgacttagaaatctgttggatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cttaagtgctattgaaagtacagcttcatgttcaggtatgacttagaaatctgttggatg 194

                                                                       
Query: 361 tgagtttcttaggaaggaacatggccttggataaggtgagtatctcaaggtgagaaaagt 420
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgagtttcttaagaaggaacatggccttggataaggtgagtatctcaaggtgagaaaagt 134

                           
Query: 421 tcctgaaggaactggc 436
           ||||||||||||||||
Sbjct: 133 tcctgaaggaactggc 118


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space:   353129
Effective search space used:   353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)