Query= MSMg01no361_n11.b1 MSMg01no361_n11.b1 CHROMAT_FILE:
MSMg01no361_n11.b1 PHD_FILE: MSMg01no361_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:00 2005
(281 letters)
>mm_chr6_106000237_106000917
Length = 681
Score = 397 bits (205), Expect = e-115
Identities = 217/221 (98%)
Strand = Plus / Plus
Query: 5 gaattccattatatacatattattactgttcttattttaccagtgggaagtttaggcagg 64
||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccattaaataaatactattactgttcttattttaccagtgggaagtttaggcagg 264
Query: 65 gatttgggtactttgtatttagttgaacattactgatgctggattcaaactaatgtagcc 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtttgggtactttgtatttagttgaacattactgatgctggattcaaactaatgtagcc 324
Query: 125 aaatttcagagtttgatctgggccctttcttccttgtgcagtgtaagcatgtaggacaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaatttcagagtttgatctgggccctttcttccttgtgcagtgtaagcatgtaggacaag 384
Query: 185 tagtcatttgtcagtatatatatatatatatatatatatat 225
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagtcatttgtcagtatatatatatatatatatatatatat 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no361_n11.g1 MSMg01no361_n11.g1 CHROMAT_FILE:
MSMg01no361_n11.g1 PHD_FILE: MSMg01no361_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:00 2005
(595 letters)
>mm_chr6_106148250_106149244
Length = 995
Score = 975 bits (504), Expect = 0.0
Identities = 518/524 (98%), Gaps = 3/524 (0%)
Strand = Plus / Minus
Query: 1 actatgaaaagagataatcaaatgttggagcacactggcttagaaacctcagtttagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 actatgaaaagagataatcaaatgttggagcacactggcttagaaacctcagtttagata 465
Query: 61 tagccccaggattctacatttgtaggatctgaaaatttaagtgttagaattaatttctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tagccccaggattctacatttgtaggatctgaaaatttaagtgttagaattaatttctag 405
Query: 121 aagtatttggtgctcatagataggagagtggtatctttgggtatttatctcaataatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aagtatttggtgctcatagataggagagtggtatctttgggtatttatctcaataatttt 345
Query: 181 catggaaacagtaaagatcaaaattccatactgattcataatcagtgaacaaagtttata 240
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 344 catggaaacaataaagatcaaaattccatactgactcataatcagtgaacaaagtttata 285
Query: 241 tttacataaaattaataaattcactttaatttttacagatttactgaatttaagataaag 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tttacgtaaaattaataaattcactttaatttttacagatttactgaatttaagataaag 225
Query: 301 tttaaataataaatccatttgtatgcaatggtggcacaaacctttaattccagcactcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tttaaataataaatccatttgtatgcaatggtggcacaaacctttaattccagcactcag 165
Query: 361 gaggcagagaggaaggtgaatctgagttcaaagccagcctggtctatagagtgaatttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gaggcagagaggaaggtgaatctgagttcaaagccagcctggtctatagagtgaatttca 105
Query: 421 gggcagcccaggctacacaaagaaaccctattttaaaaaatctaaagaaataaatatact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 gggcagcccaggctacacaaagaaaccctattttaaaaaatctaaagaaataaatatact 45
Query: 481 aacaattatgaatataattgataacctttc---cttctctcatc 521
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 44 aacaattatgaatataattgataacctttccttcttctctcatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
