Query= MSMg01no362_a22.b1 MSMg01no362_a22.b1 CHROMAT_FILE:
MSMg01no362_a22.b1 PHD_FILE: MSMg01no362_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:17 2005
(475 letters)
>mm_chr6_67112225_67113099
Length = 875
Score = 839 bits (434), Expect = 0.0
Identities = 461/472 (97%), Gaps = 4/472 (0%)
Strand = Plus / Plus
Query: 4 gaattcattagtatacacttgtgaacatacatacttcccccacacacatgtacacacaca 63
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 208 gaattcattagtaaacacttgtgaacatacatacttcccccccacacatgtacacacaca 267
Query: 64 catgcacacaggcacacacacacatgcacccaccaaagcaaattaacacacagtcatgca 123
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 268 catgcacacaggcatacacacacgtgcacccaccaaagcaaattaacacacagtcatgca 327
Query: 124 tatcttcacatatgtgcatgcacatgcccacaacagcacatatatacatacatatatgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tatcttcacatatgtgcatgcacatgcccacaacagcacatatatacatacatata---- 383
Query: 184 tgtgtgtgtgtgtacatccacttgcttatataactgcactcatacccataccttcaaaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtgtgtgtgtgtacatccacttgcttatataactgcactcatacccataccttcaaaca 443
Query: 244 cacatgtgtattcatacagtcatgtatttacatgtatatgtgtatgcatacatatctgca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 444 cacatgtgtattcatacagtcatgtatttacatgtatatgtgtatgcatacatatttgca 503
Query: 304 tgtacatactgtacacatgtaggcacatgcacatatgcatgcatgtgcgttagtagacac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtacatactgtacacatgtaggcacatgcacatatgcatgcatgtgcgttagtagacac 563
Query: 364 tcatgcacatacttgtacacatcacattgggttctaaagtagacaaagctcagtggagat 423
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 564 tcatgcacatacttgtacacatcacattgggttctaaagttgacaaagctcagtggagat 623
Query: 424 ctgaggtgggaactggaaacctgaacactgctacacccactctccctggctc 475
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 624 ctgaggtgggaactggaaacctgaacactgctacacccgctctccctggctc 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_a22.g1 MSMg01no362_a22.g1 CHROMAT_FILE:
MSMg01no362_a22.g1 PHD_FILE: MSMg01no362_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:17 2005
(494 letters)
>mm_chr6_67278943_67279837
Length = 895
Score = 638 bits (330), Expect = 0.0
Identities = 345/350 (98%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 1 ttcctttgctacttgtatttattttactttccttctcttgtctattactccagctataac 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 350 ttcctttcctacttgtatttattttactttccttctcttgtctattactccagttataac 291
Query: 61 ttgatgatgtctgtactcatgatcttaataggattgcatatgcaacctttgtcaggttga 120
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttgaagatgtctgtgctcatgatcttaataggattgcatatgcaacctttgtcaggttga 231
Query: 121 a-ttttttttctctatctcaatattctccagaattttaaatgccttttcagcatctatgg 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atttttttttctctatctcaatattctccagaattttaaatgccttttcagcatctatgg 171
Query: 180 cagtgatcatctaatttctttcctttgcatgtgttgaacaatccttgcaccactggtata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cagtgatcatctaatttctttcctttgcatgtgttgaacaatccttgcaccactggtata 111
Query: 240 aagccaacttgatcatgactaatgacatttttgttgtattctgtttaaaaatattttgtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aagccaacttgatcatgactaatgacatttttgttgtattctgtttaaaaatattttgtg 51
Query: 300 ggttagagagaatgctcagcggttaaaagcactgactgctcttccaaagg 349
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 ggttagagagaatgctcagcggttaaaagcactgactgctcttccaaagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
