Query= MSMg01no362_g10.b1 MSMg01no362_g10.b1 CHROMAT_FILE:
MSMg01no362_g10.b1 PHD_FILE: MSMg01no362_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:45 2005
(164 letters)
>mm_chr6_107503181_107503744
Length = 564
Score = 271 bits (140), Expect = 2e-77
Identities = 143/144 (99%)
Strand = Plus / Plus
Query: 21 atttggtcagtaccatcatggtggatgtaccgatgaaaactgacactggatttcagcaga 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atttggtcagtaccatcatggtggatgtaccgatgaaaactgacactggatttcagcaga 280
Query: 81 gactgaaagaaaagggtggattagagagtagatttctctcagtcacaagtatgtgtggat 140
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 281 gactgaaagaaaagggtggattagagagtagatttctctcagtcacaagtgtgtgtggat 340
Query: 141 ggggtggaccaggtctgtacaaat 164
||||||||||||||||||||||||
Sbjct: 341 ggggtggaccaggtctgtacaaat 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no362_g10.g1 MSMg01no362_g10.g1 CHROMAT_FILE:
MSMg01no362_g10.g1 PHD_FILE: MSMg01no362_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:45 2005
(537 letters)
>mm_chr6_107695554_107696491
Length = 938
Score = 994 bits (514), Expect = 0.0
Identities = 532/538 (98%), Gaps = 1/538 (0%)
Strand = Plus / Minus
Query: 1 actgaagacataatttagagacacaggacaataagatgaggagctcagatcagcagtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 actgaagacataatttagagacacaggacaataagatgaggagctcagatcagcagtggc 679
Query: 61 ccaaagcttttctactgtctaggtctgaggaacaaggcatgaacatggggacccagtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ccaaagcttttctactgtctaggtctgaggaacaaggcatgaacatggggacccagtcat 619
Query: 121 ggaggtccacaaggtacatcactgagaaaggggtctcagggcaatagtagaagttgtaaa 180
||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 618 ggaggcccacaaggtgcatcactgagaaaggggtctcagggcaagagtagaagttgtaaa 559
Query: 181 ggaatccagccatggccagtgtcacaatgcagaggcaggaaaaacagggaaggaacaagc 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 558 ggaatccagccatggccagtgtcacaatgtagaggcaggaaaaacagggaaggaacaagc 499
Query: 241 accctagtacctctctcccacttctgaactctgtagtctaacagcaggcttagcctgagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 accctagtacctctctcccacttctgaactctgtagtctaacagcaggcttagcctgagg 439
Query: 301 tcatctgagacacagcacctatgatataaagatgatccaagatagtctgtgcaaacagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcatctgagacacagcacctatgatataaagatgatccaagatagtctgtgcaaacagga 379
Query: 361 aaggtaagagagtgacctaccttggtagccaactagctgaagggttctaaggaatccttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaggtaagagagtgacctaccttggtagccaactagctgaagggttctaaggaatccttt 319
Query: 421 ttgtttca-ttttttgctccttatcaataagaaggaataataacatttaaattttcttga 479
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttgtttcatttttttgttccttatcaataagaaggaataataacatttaaattttcttga 259
Query: 480 cattgctgtaaaaattagaggacaaaacagaggtacctcatctcattaattttatatt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cattgctgtaaaaattagaggacaaaacagaggtacctcatctcattaattttatatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 938
Length adjustment: 10
Effective length of query: 527
Effective length of database: 928
Effective search space: 489056
Effective search space used: 489056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
