Query= MSMg01no362_o21.b1 MSMg01no362_o21.b1 CHROMAT_FILE:
MSMg01no362_o21.b1 PHD_FILE: MSMg01no362_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:28 2005
(479 letters)
>mm_chr6_133732745_133733626
Length = 882
Score = 801 bits (414), Expect = 0.0
Identities = 459/476 (96%), Gaps = 5/476 (1%)
Strand = Plus / Minus
Query: 8 ttcatactataacacagtaaattacttgcttgggtaaggaagctgagtgttttttactca 67
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttcatactataagacagtaaattacttgcttgggtaaggaagctgagtgttttttactca 486
Query: 68 gagaatcaaaacatagcattgcccttgactgtccttatcttcctgtagtgtaacatgcat 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gagaatcaaaacatagcattgcccttgactgtccttatcttcctgtagtgtaacatgcat 426
Query: 128 ttgaactgaattcaatgctgggaagacagacccactctcatctagcttgctgtctgttct 187
||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||
Sbjct: 425 ttgaactgaattctatgctgggaagacagacccact-tcatctagctagctgtctgtact 367
Query: 188 ttgtttatttccttataaaattctatgttctctccctgtaggaatccttcataaatattt 247
||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||
Sbjct: 366 ttgtttatttccttataaaattctacgttctctccccgtaggaatcctccataaatactt 307
Query: 248 aaatactttgttaaatgtttctgattaacttatggatgtagaatgagtgtgactatacct 307
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 306 aaatactttgttaaatgtttctgattaactcatggatgtagaatgagtgtgactctacct 247
Query: 308 ttattcatttttt----ttgttgcaatgccctattacctctttggatgtgagaggacaac 363
||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 246 ttatttattttttgttgttgttgcaatgccctattacctgtttggatgtgagaggacaac 187
Query: 364 gggcagatattagtttctccttctacaatgtgggcctcagggattaaagacacatccctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gggcagatattagtttctccttctacaatgtgggcctcagggattaaagacacatccctt 127
Query: 424 atgtggccccatttccttcttttggaagaacaatgagaaaatagatgctttgaacc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atgtggccccatttccttcttttggaagaacaatgagaaaatagatgctttgaacc 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 882
Length adjustment: 10
Effective length of query: 469
Effective length of database: 872
Effective search space: 408968
Effective search space used: 408968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_o21.g1 MSMg01no362_o21.g1 CHROMAT_FILE:
MSMg01no362_o21.g1 PHD_FILE: MSMg01no362_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:28 2005
(439 letters)
>mm_chr13_56828603_56829441
Length = 839
Score = 360 bits (186), Expect = e-103
Identities = 207/214 (96%)
Strand = Plus / Plus
Query: 1 aatccacaacacagccttctggttcagttcaggaacctgagccacaatgaaccgcacata 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatccacaacacagccttctggttcagttcaggaacctgagccacaatgaaccgcacatg 260
Query: 61 ccacaaaacaccacatttcctgattctttccaccagcccaacaatgctcctttcccctta 120
||||||||| |||| ||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 261 ccacaaaacgccacgtttcccgattctttccaccaacccaacaacgctcctttcccctta 320
Query: 121 tctcctaacagcccctatcctccttcccctgctagcagcacatatcccaactccccagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcctaacagcccctatcctccttcccctgctagcagcacatatcccaactccccagca 380
Query: 181 agctctggacctggaagtccatttcaagtcccag 214
||||||||||||||||||||||||||| ||||||
Sbjct: 381 agctctggacctggaagtccatttcaactcccag 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
