Query= MSMg01no364_h01.b1 MSMg01no364_h01.b1 CHROMAT_FILE:
MSMg01no364_h01.b1 PHD_FILE: MSMg01no364_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:33 2005
(319 letters)
>mm_chr6_86780682_86781399
Length = 718
Score = 543 bits (281), Expect = e-159
Identities = 304/319 (95%), Gaps = 13/319 (4%)
Strand = Plus / Minus
Query: 1 tctccttactgagacctccctccccagttcagccaccccacctcatctgagacctgtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tctccttactgagacctccctccccagttcagccaccccacctcatctgagacctgtaca 344
Query: 61 ttcacacatctgctttagagagtggatggaggcagccaaaagccacagacaggacggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttcacacatctgctttagagagtggatggaggcagccaaaagccacagacaggacggctg 284
Query: 121 ggtccctactgctcagtcctctgggtatgaacaaaagtagattcatccaagattccacag 180
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 283 ggtccctactgctcagtcctctggg-atgaacaaaagtacattcatccaagattccacag 225
Query: 181 acgtggaagagcagagcagggaataagggtttgtatcttcaagtgagggctgtaacctat 240
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 224 acgtggaagagcagagcaggga------------atcttcaagtgagggctgtaacctat 177
Query: 241 tcccatcctaagcacttgccttggaaactgtgcataaaggcagcttaggagaatccggtt 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 176 tcccatcctaagcacttgccttggaaagtgtgcataaaggcagcttaggagaatccggtt 117
Query: 301 aaaagggttcccgatgcca 319
|||||||||||||||||||
Sbjct: 116 aaaagggttcccgatgcca 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_h01.g1 MSMg01no364_h01.g1 CHROMAT_FILE:
MSMg01no364_h01.g1 PHD_FILE: MSMg01no364_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:33 2005
(368 letters)
>mm_chr6_86574197_86574964
Length = 768
Score = 704 bits (364), Expect = 0.0
Identities = 367/368 (99%)
Strand = Plus / Plus
Query: 1 cagtgctagcgccacttcttagagcctgcatctgagaactgcagtttgggatgtgtgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgctagcgccacttcttagagcctgcatctgagaactgcagtttgggatgtgtgtgt 260
Query: 61 gtggtgcatgtgtgtcgtaggaagtgtgcacacacacgtgtgtgaagagaaggctccact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggtgcatgtgtgtcgtaggaagtgtgcacacacacgtgtgtgaagagaaggctccact 320
Query: 121 gttggacgacaaacagcagcggcagcaaaaatagccacattgttggcagggccccgtgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttggacgacaaacagcagcggcagcaaaaatagccacattgttggcagggccccgtgca 380
Query: 181 aagtgacatcaggcgtgcagatctcaggatggccgggtgggagcagagaaccgtgctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtgacatcaggcgtgcagatctcaggatggccgggtgggagcagagaaccgtgctcaa 440
Query: 241 gctggtgaaggtcaggaagccctctcgggctgaggtaagagcaccttcctattcctaacc 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 gctggtgaaggtcaggaagccctctcgggctgagggaagagcaccttcctattcctaacc 500
Query: 301 caccttccttgctgccttgaaaagctctaggtcacagtctgacaggagctgcaaggagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccttccttgctgccttgaaaagctctaggtcacagtctgacaggagctgcaaggagtc 560
Query: 361 ctgtgtag 368
||||||||
Sbjct: 561 ctgtgtag 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
