NNNNTTCAAAATTTGGCGGCGCTAAACGACTCACTAATTCTAGAGAATCC
GCGGAATTCTCAACTTTGCCATACCGAATGGCAGAGAAGCACTTGAAAAA
ATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGAC
AGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTG
GTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTCC
TCAGAAAATTGGACATAGTACTATTTTTTTATCCAGCAATACCTCTCCTG
GGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCAC
TATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCA
GATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACA
ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGC
CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCAC
AAAGGAACTCACACAATATGGACTCACTGATAAGTGGATATTAGCCAAAA
CCTAGATACCCTTGATATTAGAAAAAATTTCTTAACCCATGAAACTTCCG
AAAAAGAAGACTGGAAGGGGGGACCTATGCCCCTCCCTAAATGGGGGACA
AAAAACCCTGGGAAGAAN

NNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCCCCAT
TTTTAATGGGGTTATTCTGCCTTTTTTTAAACCAACAGCTAATATTTTGC
TGTATTTATCACAGTGTAATTTGATATCCTTTGATAAAACCTTATGGTGT
GGTAAAATGTGACATATGTATAATTTATACTCTAGTTGTGAAAGGTTTTA
CCCCTGTTGCATAAAGCTAGAGCCTCTCTAAGTTGGAGTCTGGTCAGAGA
AACCAAGTGGGTAGAGGAAGGTTTTCTCTAAGGCATGTATGGCAAACTCA
TGCTTGTTTGCTCCATTGACAAGATGCTGAATGCAGGGTTATTCATTCCA
TCCTAGACTGCTAATTCCAATAACCTACTGAAGTCCATTTCAGTTTTGAG
ATGATCCTGAAATCATCTCTTAACAGAAAAACAAACAACAAGTGGATGCT
CACAGACATCTATTGGATGGAACACAGGACCCCCAATGAAGGAGCTAGAA
NAAATATCCAAGGAGCTAATGGGTTCTGCAACCCTATAGGAAGAAACACA
TATGAACTAACCAGCACCCCCCCAGAGCTTGTGGGTCTAATTGGATATAA
ACAGAGGAAGGCCTATAGGCCATCAATTGGAGGAAAGCCCTTTGTCTTGC
CAAATGTTTCTCCCCTAAAAGGAAAGCCCCATTAAAAAATTGTATTGGGG
GTTTGGAACAATTN

Query= MSMg01no366_m17.g1 MSMg01no366_m17.g1 CHROMAT_FILE:
MSMg01no366_m17.g1 PHD_FILE: MSMg01no366_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:44 2005
         (473 letters)



>mm_chr6_103478856_103479728
          Length = 873

 Score =  748 bits (387), Expect = 0.0
 Identities = 423/435 (97%)
 Strand = Plus / Plus

                                                                       
Query: 38  tctgcctttttttaaaccaacagctaatattttgctgtatttatcacagtgtaatttgat 97
           |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 238 tctgcctttttttaaaccaacagctaattttttgctgtatttattacagtgtaatttgat 297

                                                                       
Query: 98  atcctttgataaaaccttatggtgtggtaaaatgtgacatatgtataatttatactctag 157
           |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 298 atcctttgataaaaccttatggtgtggtaaaacgtgacatatgtataatttattctctag 357

                                                                       
Query: 158 ttgtgaaaggttttacccctgttgcataaagctagagcctctctaagttggagtctggtc 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttgtgaaaggttttacccctgttgcataaagctagagcctctctaagttggagtctggtc 417

                                                                       
Query: 218 agagaaaccaagtgggtagaggaaggttttctctaaggcatgtatggcaaactcatgctt 277
           ||||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||||
Sbjct: 418 agagaaaccaactgggtagaggaaggctttctctaaggcatgtatggcacattcatgctt 477

                                                                       
Query: 278 gtttgctccattgacaagatgctgaatgcagggttattcattccatcctagactgctaat 337
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 478 gttcgctccattgacaagatgctgaatgcagggttattcattccatcctagactactaat 537

                                                                       
Query: 338 tccaataacctactgaagtccatttcagttttgagatgatcctgaaatcatctcttaaca 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 538 tccaataacctactgaagtccatttcagttttgagatgatcctgaaatcatctgttaaca 597

                                                                       
Query: 398 gaaaaacaaacaacaagtggatgctcacagacatctattggatggaacacaggaccccca 457
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 598 gaaaaacaaacaacaagtggatgctcacagacatctattggatggaacacagggccccca 657

                          
Query: 458 atgaaggagctagaa 472
           |||||||||||||||
Sbjct: 658 atgaaggagctagaa 672


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space:   399569
Effective search space used:   399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)