Query= MSMg01no367_b10.b1 MSMg01no367_b10.b1 CHROMAT_FILE:
MSMg01no367_b10.b1 PHD_FILE: MSMg01no367_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:08 2005
(502 letters)
>mm_chr6_32021973_32022870
Length = 898
Score = 878 bits (454), Expect = 0.0
Identities = 486/498 (97%), Gaps = 4/498 (0%)
Strand = Plus / Minus
Query: 5 gaattcaagacaagattgtgttgtatgtaggttctgttaaatgaaaaaaggagagaggac 64
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 698 gaattcaagacaagattgtgttgtat-taggttctgttaaatgaaaaaaggagagaggac 640
Query: 65 aagagaggagggttggggtaagatggaaggaaagatatatttaagaagctcaaggaagca 124
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 639 aagagaggaggggtggggtaagatggaaggaaagatatatttaagaagcccaaggaagca 580
Query: 125 atctggaaggtttatgtctccctcaagggctttgagattggagtatgtcctatctagtgt 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 atctggaagatttatgtctccctcaagggctttgagattggagtatgtcctatctagtgt 520
Query: 185 tagccaacagggttctagccaagagcagttggggattgagtgcagaactttcagtcacag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tagccaacagggttctagccaagagcagttggggattgagtgcagaactttcagtcacag 460
Query: 245 taggataacaggtccaggaccttggtgatgcaagtaagaaggtcaagactgaggggggag 304
||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 459 tagaataacaggtccaggaccttggtgatgcaagt---aaggtcaagactgaggggtgag 403
Query: 305 aggggagaggactggagcagcatgtgggagtgggagtcaagtcctgagcttgagtgaatg 364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 402 aggggagaggactggagcagcatgtgggagtgggagtcaagtcccgagcttgagtgaatg 343
Query: 365 gagaacagaagccaagagacatagccagggcaaacattcagagcatcagcaggaaggact 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aagaacagaagccaagagacatagccagggcaaacattcagagcatcagcaggaaggact 283
Query: 425 gcttgattctgagggtgaggagtctgtaggcacaggaccaagaagataacttagccatcc 484
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gcttgattctgagggtgaggaatctgtaggcacaggaccaagaagataacttagccatcc 223
Query: 485 aagcaacagcaatgggaa 502
||||||||||||||||||
Sbjct: 222 aagcaacagcaatgggaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 898
Length adjustment: 10
Effective length of query: 492
Effective length of database: 888
Effective search space: 436896
Effective search space used: 436896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_b10.g1 MSMg01no367_b10.g1 CHROMAT_FILE:
MSMg01no367_b10.g1 PHD_FILE: MSMg01no367_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:08 2005
(455 letters)
>mm_chr6_31838614_31839468
Length = 855
Score = 795 bits (411), Expect = 0.0
Identities = 444/455 (97%)
Strand = Plus / Plus
Query: 1 caggaaagtaagtttctataaatcatgtgatctatggtggtttggcaggacaccactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggaaagtaagtttctataaatcatgtgatctatggtggtttggcaggacaccactcaa 260
Query: 61 atccctgtgaagagaaccatgtgaacacactccaacttgcctttggttatgtgtgtgaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccctgtgaagagaaccatgtgaacacactccaacttgcctttggttatgtgtgtgaac 320
Query: 121 gaaccactttgagagccaggtcctcaaatcccaggcaagcttcagatgagccagtctgcc 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaccactttgggagccaggtcctcaaatcccaggcaagcttcagatgagccagtctgcc 380
Query: 181 accaccatcaagtcttccagccaaggtcccgggcacaacggcacagggaagagatgtcct 240
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 381 tccaccatcaagtcttccagccaaggtcctgggcacaatggcacagggaagagatgtcct 440
Query: 241 tcagaatcctggctcaccaaacccttgagaggacatgatggttgccatcatgtgtagtga 300
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagaatcctggctcactaaacccatgagaggacatgatggttgccatcatgtgtagtga 500
Query: 301 ttcatctcggggtggtttgttatacaggtgataaggctgaagcaccaaatctgtggcgac 360
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 501 ttcatcttggggtggtttgttatacaggtgataaggctgaagcaccgaatctgtggtgac 560
Query: 361 gaaaaatggtgctctcctcggggtgagagaaaggtcctttggtactatgagtttgtcatc 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 gaaaaatggtgctctcctcggggtgagagaaaggtcctttggtactgtgagtttgtcatc 620
Query: 421 actcttgcctttcttttgaagtgctggagttttga 455
|||||||||||||||||||||||||||||||||||
Sbjct: 621 actcttgcctttcttttgaagtgctggagttttga 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
