Query= MSMg01no367_d15.b1 MSMg01no367_d15.b1 CHROMAT_FILE:
MSMg01no367_d15.b1 PHD_FILE: MSMg01no367_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:19 2005
(553 letters)
>mm_chr6_50147305_50148257
Length = 953
Score = 1033 bits (534), Expect = 0.0
Identities = 546/550 (99%)
Strand = Plus / Minus
Query: 4 ggaattcagatactacctcttaaaaatctatcctatatagtgccgaaggaggtattacca 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ggaattcagatacgagttcttaaaaatctatcctatatagtgccgaaggaggtattacca 694
Query: 64 gatatctgtacctgttgcatctttccatctacttccatggcttatgaatattctgtacat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gatatctgtacctgttgcatctttccatctacttccatggcttatgaatattctgtacat 634
Query: 124 tctgttttggtagctgtagagtgaaattcctaacactattaaggtgagtctaagacaaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tctgttttggtagctgtagagtgaaattcctaacactattaaggtgagtctaagacaaga 574
Query: 184 caggtagttgatttctagctgacttctatataatcctttccaaataggtgttatcttata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 caggtagttgatttctagctgacttctatataatcctttccaaataggtgttatcttata 514
Query: 244 cggtctgtataaattctggacccccacttgtattggctgttcaactcaaagccaatttac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cggtctgtataaattctggacccccacttgtattggctgttcaactcaaagccaatttac 454
Query: 304 ccccttcatttagaaagacagagaatcttaacagtgtgatgtgaaaactctaagttgtgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccccttcatttagaaagacagagaatcttaacagtgtgatgtgaaaactctaagttgtgc 394
Query: 364 cagatacaccccatagactccagctttatttctgtggagttgctgtctgcatcccaccaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cagatacaccccatagactccagctttatttctgtggagttgctgtctgcatcccaccaa 334
Query: 424 gtactaccaactggtctggaacaacccagtgggtggagcacctgagtgagggcttctgca 483
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 333 gtactaccaactggtctggaacaaccgagtgggtggagcacctgagtgagggcttctgca 274
Query: 484 cgagcaagggaagcttgccatacactcccacaagtatccccttcacatggagctctaccc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cgagcaagggaagcttgccatacactcccacaagtatccccttcacatggagctctaccc 214
Query: 544 atatgaactg 553
||||||||||
Sbjct: 213 atatgaactg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_d15.g1 MSMg01no367_d15.g1 CHROMAT_FILE:
MSMg01no367_d15.g1 PHD_FILE: MSMg01no367_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:19 2005
(521 letters)
>mm_chr6_49963475_49964394
Length = 920
Score = 946 bits (489), Expect = 0.0
Identities = 510/517 (98%), Gaps = 1/517 (0%)
Strand = Plus / Plus
Query: 1 tgtgctaggcgtcgagaccgcattcagagccccacagttagggagaaaaggcggttcgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgctaggcgtcgagaccgcattcagagccccacagttagggagaaaaggcggttcgta 260
Query: 61 cacagcagcagttggctagcaatagtaggtttcatgctattaaaaacataaaagaatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacagcagcagttggctagcaatagtaggtttcatgctattaaaaacataaaagaatcat 320
Query: 121 cgaaaagtcagcatgccatgcaagtcgtacaaagaaagatgccacagctggacctgacct 180
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 caaaaagtcagcatgccatgcaagtcatacaaagaaagatgccacagctggacctgacct 380
Query: 181 gtggtctgagaggttaggagggctgaagggtttagaaaaaaatgagaagagaggagatgt 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 gtggtctgagaggttaggagggctgaagggtttagaaaaaa-tgagaagagaggagatgt 439
Query: 241 agtatagagacaatgacaggtcccagtgcagtccaacccgagacctgtataggtgcctaa 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 440 agtatagagacaatgacaggtcccagtgcagtccaacccgggacctgtataggtgcctaa 499
Query: 301 acaaatgtcgcatcatcagccacagcccctttctcaggccattattcactatttgtaaat 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acaaatgtcgcatcatcagccgcagcccctttctcaggccattattcactatttgtaaat 559
Query: 361 catgatgacgaagagactggagcccccacgtgagcacactgatttggagtccctgcctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catgatgacgaagagactggagcccccacgtgagcacactgatttggagtccctgcctat 619
Query: 421 gcacatgcccagtaagtgcacactgaaatgtcctctaaaagtgaccagttgtagaagctt 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcatatgcccagtaagtgcacactgaaatgtcctctaaaagtgaccagttgtagaagctt 679
Query: 481 cagatcggcaaatgtatgaggagttcagcttccttgg 517
|||||||||||||| ||||||||||||||||||||||
Sbjct: 680 cagatcggcaaatggatgaggagttcagcttccttgg 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 920
Length adjustment: 10
Effective length of query: 511
Effective length of database: 910
Effective search space: 465010
Effective search space used: 465010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
