XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTT
GTGAAGGACAGCGAGTAATCAACTGTGATGGTGAGGATTCATATTAGATG
AAAAAAAGAATTAGGTGGTCTCAGACTGATTTTACACCCATACTTCTCTG
TAAGTCATATTTTTCTACATGAGTTTTCTAACACATCACAGCTATGTGAA
AAGATCCAAAAAAGAAATGTATTCTCAAAGTTTCATCAGCCAGCAGCTGA
ATGGATAGCTAGGAAATCTATTACAAAAATAAAAGTAAAAACCTGAGCTG
GACACACTGAAGTCCCCATTTTCTATCTGAAGGGGTGAACCCTGAGATGT
AGCTGAAATAAAACCACATTATGAGAAGAAAAAAAGAATAAGGCTTAGAC
AGAAATATAGCAGAGCTGAACACATTTGACTGGAACTACTGCAAGATTAA
ACAAAAGAAACAGCACTGTGATGATAATCTCAAAATAAATTTTAGAAGTA
ATGAAAACTGTTACTATCATCTCAACACACAGTAAGTAGCTAAATAAATG
TGAAGCCATGGAATTATTAAATAATGCAGTCCACCACTGTAGACTTGGCC
ATGAATACATCCTCCAAGATTGTACTTAAAACACAATATATAACTTGAAA
GAACAGTCAGATTTCTTTGCCGTGGGTATTTTGGATCTCACCTTGATAAA
TTATACAACTTATGATGTCTCTTCCTATGTGTGTATACTAATTTGTTAAA
GTTTAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCAAAACCAGCCTGCATTCACTAGGTGGCAAAGCAAA
CTGTGTCTTGACAGAAGGAGCTGTAGAAACAAAATATGATGGAATATCCT
GTGAAGGAGAGGTTGTCTTGGTTTCTGTTCCTGTTGTGATAAAACACACA
TGAAAAAATGAGGTTAACAGAGAAAGGGTTCATTTTGTCTCAGAGAAAGT
ACATTACACCATGATGGAGAAATTAAGGTTGCAGGAACCTAAGAAAGTAA
CTGGTTGAGTTGTACTCACAAATAGAAAACAGAGAAAATTCAATTCTGCT
GCTCATATAGCTTCAGCCCTTTAATGTGGACCTTTTGCCTACAAGTAACT
TAACCAAAAGACTGTTGTGTAGGTATGCTCAGAGGCTTGTCTCCTAGGTG
AGTCTAGATCCAGTCAACTTGACAAAATTAACCTTTAACAATTACTATCA
CTAACTATATTGTCGTCCTTAAGAATTATGAGTTTACTAACTTTAATTAA
ATTATCAAATGGTATAAAATGTCTTGGTTTTACTATTTTTATAACAATAA
CCACAGAATTTTTTCCTTCTAAAAAAGTGATTCATTCAGATTAATGATGG
TTGGAATTCGCTGAATACCCCTGAAAATTGTTGGGCTGCCCAACAAAGGA
AAAATAATTCCTTATTATGTGTGAAGAAAATAATTGGTTCCAATGGCTAT
ATATCAAAGG

Query= MSMg01no369_a05.b1 MSMg01no369_a05.b1 CHROMAT_FILE:
MSMg01no369_a05.b1 PHD_FILE: MSMg01no369_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:37 2005
         (572 letters)



>mm_chr6_44632972_44633943
          Length = 972

 Score = 1062 bits (549), Expect = 0.0
 Identities = 564/569 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctttgtgaaggacagcgagtaatcaactgtgatggtgaggattcatattagatg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ggaattctttgtgaaggacagcgagtaatcaactgtgatggtgaggattcatattagatg 713

                                                                       
Query: 64  aaaaaaagaattaggtggtctcagactgattttacacccatacttctctgtaagtcatat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aaaaaaagaattaggtggtctcagactgattttacacccatacttctctgtaagtcatat 653

                                                                       
Query: 124 ttttctacatgagttttctaacacatcacagctatgtgaaaagatccaaaaaagaaatgt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ttttctacatgagttttctaacacatcacagctatgtgaaaagatccaaaaaagaaatgt 593

                                                                       
Query: 184 attctcaaagtttcatcagccagcagctgaatggatagctaggaaatctattacaaaaat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 attctcaaagtttcatcagccagcagctgaatggatagctaggaaatctattacaaaaat 533

                                                                       
Query: 244 aaaagtaaaaacctgagctggacacactgaagtccccattttctatctgaaggggtgaac 303
           |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 532 aaaagtaaaaacctgagctggacacagtgaagtccccattttctatctgaaagggtgaac 473

                                                                       
Query: 304 cctgagatgtagctgaaataaaaccacattatgagaagaaaaaaagaataaggcttagac 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cctgagatgtagctgaaataaaaccacattatgagaagaaaaaaagaataaggcttagac 413

                                                                       
Query: 364 agaaatatagcagagctgaacacatttgactggaactactgcaagattaaacaaaagaaa 423
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agaaatataccagagctgaacacatttgactggaactactgcaagattaaacaaaagaaa 353

                                                                       
Query: 424 cagcactgtgatgataatctcaaaataaattttagaagtaatgaaaactgttactatcat 483
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cagcactgtgatgagaatctcaaaataaattttagaagtaatgaaaactgttactatcat 293

                                                                       
Query: 484 ctcaacacacagtaagtagctaaataaatgtgaagccatggaattattaaataatgcagt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ctcaacacacagtaagtagctaaataaatgtgaagccatggaattattaaataatgcagt 233

                                        
Query: 544 ccaccactgtagacttggccatgaataca 572
           ||||||||| |||||||||||||||||||
Sbjct: 232 ccaccactgaagacttggccatgaataca 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)