XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TAGATTTACAAACAAATAAACAACCTCTTCTGAAACAGAATAATCCACAT
TAGGTTGTAGTTTGTGGAAGAAGGATTTAAAAAGAACACCACCTAAAAAA
CTATTATGCAAGAGAGGGGCTCTACGCTGGGACTGGATACAGGTGGAAGT
CTTGAAATTCCCCTTTGACAGCAGGAAGTGGTCCTTATATTCCTGCACCA
GCATTAAGGTCATCAGTGCCGACCGTCATGCTGGCTGGCCTCTGGTATCC
GGCTCTGTGTTGCCGCAGCCGCAGAAGAGGGCAAAGAGGCTCTGTGCACT
CCCTGGGCCTTTTTATTTTTACATTTGATAACTAGATTTAAGAAAAATAA
CAAGTATCAAGTACAACCTTTAATCTCTTAAATTTCACAGTAGGTATTCC
AAATATTTGATTTTTGGCTTTTGGTAATTATATAATTTTTCAAAAAACAA
AACAAAACAAAACACCACAGTGGATTTAAGACTATTCATTTAATAATTTA
ACTTCATAAAACATCAATACTAAATTGTAACATTGCAAACATGATTTAAA
TATATCTTAAGCTACTGAAGAATGAAAATAGAACAAATCACCTGATCTTT
TTAAAATCACAACTTCTCCTTTCCTTGGACACCAATATAGGAAAATTACC
TCCCTGATCCCCACCCAATTACCCGGGTTTTTCTATTAATAAAAAATAAA

NTTTGGATTTNTTGGNNNNCNCTGTTCNTNACTTTANTGACCTATANTTT
TTCCGGNAATTCCTTTCCNNCTACAATACACTTTTCTTANNGATCCTGGA
TANCTTGGNATACNCTTANATTCCCTACNNTTGATATTCTTANATATTTT
CCTGGAAANGTGAACTATGTTACANTTAGAGNTGGGTCTGAGGGAGGTGT
AGGGGGGGAAGGAGAGGGAGGAGGGAGAGGGAGGAGGGAGGGTTNNNNTT
NTTTTTTTNNNNNNNTTTNNNTTNNNNTTTTTTTTNTTTTTTTTTTTTTT
NNNNTTNNTTTNNTTTTTNNCTTNNNNNTNTTTNNTTTTTNTNTNNTTTT
NNNNTTTTNNNTTTTTTTTTTTTTNNNNTTTTTTTTTNTNNNNTNNNNTN
NTTTTTTTNTTTNNNNTTTTTTTTTTNTNNNNTTTTTTTTTTTTTTTTTT
TNNTTTTTTTTNTTTTTTTTTTTTTTNNNTTTTTTNNNTTTTTTTNTTTT
TTTTTTTTTTTTTTTTTTTTTTNNTTNTNNTTTTTTTTTTTTTTTTTTTT
NNTTTTTTTTTTTTTTTNNTNNNTTNTTTNNNTTTTTTTTTTTTTTTTTT
TTTTNNTTTTNTTTTNNTTTTTTTTTNTTTNNNNTTTTTTTTTTTTNNTT
TTTTTTNNTTTTNNTTTNNNTTTTTTTTTTTTNTTTTTTTTTTTTTTTTT
TTTNNTTNTNTTNNTTTTTTNCNNNTTTTTTTTTTTTAAATGTGAGGGAG
AGGG

Query= MSMg01no372_b16.b1 MSMg01no372_b16.b1 CHROMAT_FILE:
MSMg01no372_b16.b1 PHD_FILE: MSMg01no372_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:47 2005
         (446 letters)



>mm_chr6_59157697_59158542
          Length = 846

 Score =  855 bits (442), Expect = 0.0
 Identities = 445/446 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaaataaacaacctcttctgaaacagaataatccacattaggttgtagtttgtggaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaataaacaacctcttctgaaacagaataatccacattaggttgtagtttgtggaaga 260

                                                                       
Query: 61  aggatttaaaaagaacaccacctaaaaaactattatgcaagagaggggctctacgctggg 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggatttaaaaacaacaccacctaaaaaactattatgcaagagaggggctctacgctggg 320

                                                                       
Query: 121 actggatacaggtggaagtcttgaaattcccctttgacagcaggaagtggtccttatatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggatacaggtggaagtcttgaaattcccctttgacagcaggaagtggtccttatatt 380

                                                                       
Query: 181 cctgcaccagcattaaggtcatcagtgccgaccgtcatgctggctggcctctggtatccg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgcaccagcattaaggtcatcagtgccgaccgtcatgctggctggcctctggtatccg 440

                                                                       
Query: 241 gctctgtgttgccgcagccgcagaagagggcaaagaggctctgtgcactccctgggcctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctctgtgttgccgcagccgcagaagagggcaaagaggctctgtgcactccctgggcctt 500

                                                                       
Query: 301 tttatttttacatttgataactagatttaagaaaaataacaagtatcaagtacaaccttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttatttttacatttgataactagatttaagaaaaataacaagtatcaagtacaaccttt 560

                                                                       
Query: 361 aatctcttaaatttcacagtaggtattccaaatatttgatttttggcttttggtaattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatctcttaaatttcacagtaggtattccaaatatttgatttttggcttttggtaattat 620

                                     
Query: 421 ataatttttcaaaaaacaaaacaaaa 446
           ||||||||||||||||||||||||||
Sbjct: 621 ataatttttcaaaaaacaaaacaaaa 646


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space:   364496
Effective search space used:   364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)