Query= MSMg01no372_p08.b1 MSMg01no372_p08.b1 CHROMAT_FILE:
MSMg01no372_p08.b1 PHD_FILE: MSMg01no372_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:49 2005
(423 letters)
>mm_chr6_111532201_111533023
Length = 823
Score = 787 bits (407), Expect = 0.0
Identities = 419/423 (99%)
Strand = Plus / Plus
Query: 1 ccatctggctgtgcattgcttcttggggccttcaggcacctttccatgaccctgtgttga 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccatctggctgtgcattgcttcctggggccttcaggcacctttccatgaccctgtgttga 260
Query: 61 gtcatctcattattcttttaatctaaagtgctctgacacctccccagggacctatgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcatctcattattcttttaatctaaagtgctctgacacctccccagggacctatgtgat 320
Query: 121 aaaggagctgaagatgttgcatttttaagatggtaggaggcctgttcttatatagatatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaggagctgaagatgttgcatttttaagatggtaggaggcctgttcttatatagatatc 380
Query: 181 ctgctgtttcttctctattacccagttcaccatccacacaccaagaagctcttgctataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgctgtttcttctctattacccagttcaccatccacacaccaagaagctcttgctataa 440
Query: 241 tgatgtcagctctcctgtgaatgtggatttttttcctaatgatagagcccaggagtaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatgtcagctctcctgtgaatgtggatttttttcctaatgatagagcccaggagtaatc 500
Query: 301 aggaagacaccatagtagaaacagtatctcagatcataatatactagtcactgtgggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaagacaccatagtagaaacagtatctcagatcataatatactagtcactgtgggctt 560
Query: 361 gatcccatactccacttcagaagaatgaatagtacagacacatgtctacatgaaagcaat 420
||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 561 gatcccatactccacttcagaagaaggaagagtacagacacatgtctacaggaaagcaat 620
Query: 421 gcc 423
|||
Sbjct: 621 gcc 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_p08.g1 MSMg01no372_p08.g1 CHROMAT_FILE:
MSMg01no372_p08.g1 PHD_FILE: MSMg01no372_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:49 2005
(447 letters)
>mm_chr6_111705169_111706014
Length = 846
Score = 783 bits (405), Expect = 0.0
Identities = 439/459 (95%), Gaps = 16/459 (3%)
Strand = Plus / Minus
Query: 1 agacatgaatctatttcagttgtatgcatattcttgacaggaatcacgggcttccagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agacatgaatctatttcagttgtatgcatattcttgacaggaatcacgggcttccagatt 485
Query: 61 agcggatcagccacttattaaccacagagcatatgtgcttccagtgaacctccgtcaacg 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agcggatcagccacttattagccacagagcatatgtgcttccagtgaacctccgtcaacg 425
Query: 121 tagtgaaaaaaacaggacaaattatcagattgttacatttggagttcatgtggtgtggat 180
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tagtg-aaaaaccaggacaaattatcagattgttacatttggagttcatgtggtgtggat 366
Query: 181 gcgaagagtggcccatcctcctgctggagggagaggaatacttttttcttggagtacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gcgaagagtggcccatcctcctgctggagggagaggaatacttttttcttggagtacaaa 306
Query: 241 ctgacatttgcaagagaggcaaggagaccaggtttaatggcttccttagtctttagataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctgacatttgcaagagaggcaaggagaccaggtttaatggcttccttagtctttagataa 246
Query: 301 agccaacaatatctagatagagaagtctctagatcttttcaac------------aatgt 348
|||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 245 agccaacagtatctagatagagaagtctctagatcttttcaacaacaacaacaaaaa--- 189
Query: 349 ataatctgagacttccaagatctatttgctacagaatcattctttaactgagtcagccag 408
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 aaaatctgagacttccaagatctatttgctacagaatcattctttaactgagtcagccag 129
Query: 409 gtgcttagagagcaccaatccaaagcatcaaggtgaaaa 447
|||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gtgcttagagagcaccaatccaaagcatcaaggtgaaaa 90
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 846
Length adjustment: 10
Effective length of query: 437
Effective length of database: 836
Effective search space: 365332
Effective search space used: 365332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
