Query= MSMg01no377_a17.b1 MSMg01no377_a17.b1 CHROMAT_FILE:
MSMg01no377_a17.b1 PHD_FILE: MSMg01no377_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:05 2005
(455 letters)
>mm_chr6_106814205_106815059
Length = 855
Score = 696 bits (360), Expect = 0.0
Identities = 429/452 (94%), Gaps = 3/452 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagggtagcctggtctacatagtgagttccagaagagccagtaagtcatagtga 64
||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 206 gaattcaagggcagcctggtctacatagtgagttccaaaagagccagtaattcatagtga 265
Query: 65 gacactattaaaaaatggagggatctagatgggcactagatggtcaaaaatccagacttg 124
||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 266 gacactatttaaaaatggagggatataaatgggcactagatggtcaaaaatccagacttg 325
Query: 125 gtcaactgaatgctttatagtcagtacctttctttattttagattatatttatgtgcgtg 184
||||| |||| |||||||||||||| |||||||| ||||||||||||||| ||||| |||
Sbjct: 326 gtcaaatgaacgctttatagtcagtgcctttcttgattttagattatattcatgtgggtg 385
Query: 185 tctttataggagaatgtgtacttcgagtaccaagagatccagttgagtacatagtctctg 244
||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 386 tctttatag-agaatgtgtacttcgagtaccaagagatccagacgagtatgtagtctctc 444
Query: 245 tgggagttggagttatagtcagacatgagccaccaacgtggatgctggaaaccaaacgaa 304
|||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 445 tgggagttggcgttatagtcagacatgagccaccaacgtgggtgctggacaccaaacgaa 504
Query: 305 tatgcagcaagaacagcaagtactcttaaatgctaagccatctctccatccttgagaata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatgcagcaagaacagcaagtactcttaaatgctaagccatctctccatccttgagaata 564
Query: 365 agaaataca-aattataattattggcctcctgccattttactttttgtttatattatcac 423
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agaaata-ataattataattattggcctcctgccattttactttttgtttatattatcac 623
Query: 424 tattattatttgccttcttgctatgtagccca 455
||||||||||||||||||||||||||||||||
Sbjct: 624 tattattatttgccttcttgctatgtagccca 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_a17.g1 MSMg01no377_a17.g1 CHROMAT_FILE:
MSMg01no377_a17.g1 PHD_FILE: MSMg01no377_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:06 2005
(468 letters)
>mm_chr6_107041698_107042565
Length = 868
Score = 862 bits (446), Expect = 0.0
Identities = 461/466 (98%), Gaps = 1/466 (0%)
Strand = Plus / Minus
Query: 1 actcctagtcactcccattctcggggtgtaatagtggggtgatgggcaagcaacgaatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 actcctagtcactcccattctcggggtgtaatagtggggtgatgggcaagcaacgaatcg 696
Query: 61 ggagctgtcatgccatatcaggtgctgaaacgtcacgctgagggttataaaagcagcgcc 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 695 ggagctgtcatgccatatcaggtgctgaaacgtcacgctgcgggttataaaagcagcgcc 636
Query: 121 attttcccggttc-ggggtcttcctgagaagcaagcaataaagctcttgctgcggaagat 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 attttcccggttcgggggtcttcctgagaagcaagcaataaagctcttgctgcggaagat 576
Query: 180 tctggtttgttgcgtctttcttgccggtcgagcgggacgcaatactttcccactctgtat 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tctggtttgttgtgtctttcttgccggtcgagcgggacgcaatactttcccactctgtat 516
Query: 240 tttaagaaaattagtagaaaatatctgagacttaaaggagccagaatttttcaaaaataa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tttaagaaaattagtagaaaatatctgagacttaaaggagccagaatttttcaaaaataa 456
Query: 300 tataaacaagttttccaactattagataaatgaatatattattattctaatataattaat 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 455 tataaacaagttttccaactattagataaatgaatacattattattctaatataattaat 396
Query: 360 gaaatctaaacacgtaaaaagtattttagagactacaaaaagagcaatagaacacagatc 419
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 395 gaaatctaaacacgtaaaaagtattttagagactagaaaaagagcaatagaacacagatc 336
Query: 420 ccctaccacttggtatttgtgatgcaatattttaagaaactgctca 465
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ccctaccacttggtatttgtgatgcaatattttaagaaactgctca 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
