Query= MSMg01no377_o21.b1 MSMg01no377_o21.b1 CHROMAT_FILE:
MSMg01no377_o21.b1 PHD_FILE: MSMg01no377_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:17 2005
(470 letters)
>mm_chr6_109678197_109679067
Length = 871
Score = 866 bits (448), Expect = 0.0
Identities = 462/467 (98%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 5 gaattctttttgttctatcattttattgaaatatttattgaatattttatggaaaaaatt 64
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattctttttgttctataattttattgaaatatttattgaatattttattgaaaaaatt 264
Query: 65 ttctatgcttttggtgcagtatactccttcttctatgaaaatagctgaaagactttttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttctatgcttttggtgcagtatactccttcttctatgaaaatagctgaaagactttttct 324
Query: 125 tttgtgttatcttagagtagttccatgttctattcatattttttaaaaatactcattgat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgtgttatcttagagtagttccatgttctattcatattttttaaaaatactcattgat 384
Query: 185 atttacaatgagaacaaatttctccatctggtcttctggctctgacatggtttttcatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttacaatgagaacaaatttctccatctggtcttctggctctgacatggtttttcatat 444
Query: 245 ggtcctttctgttggtgaggcttttcatggagctgtaatcctgcttattgattttt-acc 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 445 ggtcctttctgttggtgaggcttttcatggagctgtaatcctgcttattgattttttacc 504
Query: 304 ccctgcatcatttgatttttggttttcctgtgcaatttttcttttgaattcaatttttac 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccctgcatcatttgacttttggttttcctgtgcaatttttcttttgaattcaatttttac 564
Query: 364 ctattgcattgactttctaattccattctattctttgtaatctctttgtggagtgcatca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctattgcattgactttctaattccattctattctttgtaatctctttgtggagtgcatca 624
Query: 424 tgtattccttaggtcatttgaacttcgntgtaattattcttttaaat 470
||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 625 tgtattccttaggtcatttgaacttcgttgtaattattcttttaaat 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 871
Length adjustment: 10
Effective length of query: 460
Effective length of database: 861
Effective search space: 396060
Effective search space used: 396060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_o21.g1 MSMg01no377_o21.g1 CHROMAT_FILE:
MSMg01no377_o21.g1 PHD_FILE: MSMg01no377_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:17 2005
(344 letters)
>mm_chr6_109720301_109721045
Length = 745
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%), Gaps = 1/345 (0%)
Strand = Plus / Minus
Query: 1 atttttggtgttttcctccaacaaccagatttttatcttccaacagtataattcaaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atttttggtgttttcctccaacaaccagatttttatcttccaacagtataattcaaggtc 486
Query: 61 gcgggtgtttattgggtttagacagaaaagcaatcaaagtggtttgggttttagacgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gcgggtgtttattgggtttagacagaaaagcaatcaaagtggtttgggttttagacgcac 426
Query: 121 agagaaagagaagtttgcagtcattgcttaccctaaggattggagctttgatcacaatat 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 425 agagaaagagaagtttgcagtcattgcttaccctaaggattgcagctttgatcacaatat 366
Query: 181 gtgatctgaagtgtctcgggtatttgctgaggcttcaaggtttagagtgggagtgttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtgatctgaagtgtctcgggtatttgctgaggcttcaaggtttagagtgggagtgttctt 306
Query: 241 tttttt-tttttttcactagttgcaaaaagagtgatagtaattattgccttttattccca 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttttttctttttttcactagttgcaaaaagagtgatagtaattattgccttttattccca 246
Query: 300 agcaattttgctttctgagtgactgcattttaaatttttttgatc 344
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agcaattttgctttctgagtgactgcattttaaatttttttgatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 745
Length adjustment: 9
Effective length of query: 335
Effective length of database: 736
Effective search space: 246560
Effective search space used: 246560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
