Query= MSMg01no377_p14.b1 MSMg01no377_p14.b1 CHROMAT_FILE:
MSMg01no377_p14.b1 PHD_FILE: MSMg01no377_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:20 2005
(441 letters)
>mm_chr6_118274977_118275818
Length = 842
Score = 708 bits (366), Expect = 0.0
Identities = 427/464 (92%), Gaps = 27/464 (5%)
Strand = Plus / Minus
Query: 5 gaattcagacctttcctttgtcctaaggattggtctgagactgttcagggagaccaactg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gaattcagacctttcctttgtcctaaggattggtctgagactgttcagggagaccaactg 731
Query: 65 gggatt-----------tgacgatggcattctgagga----------------ctctctc 97
| |||| |||| ||||||||||||||| |||||||
Sbjct: 730 gagatttggtcctgccatgacaatggcattctgaggactgactctctcactctctctctc 671
Query: 98 tctctctctctctctctccttctcactcttttttttaaatttgtttttgtctttgctttt 157
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 670 tctctctctctctctctcctcctcactctttttttaaaatttgtttttgtctttgctttt 611
Query: 158 gaaacagtgtccttggctgagactcactgtgtagaccaggctggtgtgtcaggatcaaag 217
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 610 gagacagtgtccttggctgagactcactgtgtagaccaggctgatgtgtcaggatcaaag 551
Query: 218 gcgtgcacctccatgccagcttattcttactcttaatgaagtttctctccagactttaaa 277
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 550 gtgtgcacctccatgccagcttattcttactcttaaagaagtttctctccagactttaaa 491
Query: 278 aggaatcttcttatattaaagacaatcattgtagtttccctatggtgctctattgtcggt 337
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aggaatcttctcatattaaagacaatcattgtagtttccctatggtgctctattgtcggt 431
Query: 338 tataactccaaggtcatgaagaaggcttctgctggcagatccagggtggtaaggcctggc 397
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 430 tataactccaaggtcatgaagaaggcttctgctggcagatccagagtggtaaggcctggc 371
Query: 398 gtgggcccatccactcatctgcatatgttcttctatgacactgt 441
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtgggcccatccactcatctgcatatgttcttctatgacactgt 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 842
Length adjustment: 9
Effective length of query: 432
Effective length of database: 833
Effective search space: 359856
Effective search space used: 359856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_p14.g1 MSMg01no377_p14.g1 CHROMAT_FILE:
MSMg01no377_p14.g1 PHD_FILE: MSMg01no377_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:21 2005
(416 letters)
>mm_chr6_118089872_118090687
Length = 816
Score = 804 bits (416), Expect = 0.0
Identities = 416/416 (100%)
Strand = Plus / Plus
Query: 1 tctcctaggagacttggaacatggggacctttagcaaatggttaagtgcccagcactgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcctaggagacttggaacatggggacctttagcaaatggttaagtgcccagcactgct 260
Query: 61 aaatttccaagataaggcaaaaattctctaatgtattaataaagtagatataaatggcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatttccaagataaggcaaaaattctctaatgtattaataaagtagatataaatggcac 320
Query: 121 ctcactgaaatcttagcgagccacgatgccagactccagctttggcactgttagtccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcactgaaatcttagcgagccacgatgccagactccagctttggcactgttagtccaag 380
Query: 181 cccacatctactgtgtgcctacgttacacttgacatttcattaacagtttctgagaagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccacatctactgtgtgcctacgttacacttgacatttcattaacagtttctgagaagtc 440
Query: 241 cccagaagccaggtgtgacatctgcctatagtcctagcactcatgaggctgagacagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccagaagccaggtgtgacatctgcctatagtcctagcactcatgaggctgagacagaaa 500
Query: 301 aatgatatttttcaggccttcctggattacttagtaagttccagggcagcctgggatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgatatttttcaggccttcctggattacttagtaagttccagggcagcctgggatata 560
Query: 361 cattgagcccttatctcaaacaaaaagaaagtccacagatgtagggacctttcgaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattgagcccttatctcaaacaaaaagaaagtccacagatgtagggacctttcgaa 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
