XXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAATTCAAC
AGTACTATGACCAAGGTTGCTGGATGAAAACCACCAGTGAAGGGCTGTTC
TTTCTGTGCTCAATTCTCCAAGCTCAAATTCCTTGAAAGGCTGAATGCAC
TAGCATTTTATCCAAGTTCTATAAGATAATATAAGTTGTATAATTTTGCT
CCTAAAATCAATAATAACCGTGCTTTTAAGATGTTGCCCCAAATTACTCT
TGAATAATTATTCTATTCTAGCCTTTGAATTACTATATCCTACTTTTACA
TATATTTGTATTTTAAGTATTAACATTTGAAAAATAAATTTAATTGCCTT
ACATTTACTACAGATATTCAGTAAACTTGTAATAAAAATCCCAAAATATT
TTGAAAAACTCAGAAAATTGGAAATGATTCTTCTTCTATATAAAGACCCA
GCTATACCACTACTAGAATATACCCAAAAGATGCTCCAGCATACCCCAAG
GAAATGTGCTGCACTAAGTTCACAGAAGCTTTATTCATAATAGCCAGAAA
CTAGAAGCAACCCANATGTCCCTCAACCAAAGAATGGATACCAAAAATGT
GAGATATTTTATACAATGGAGTACTATCCACCCTTTTATATATATATATA
TTTTTTTTTAAAAAAAGGACATTCTGAATTTTCTCCAGCAATGGAAGAAA
CTAAAAAAATAACTCCTCTGAATGAAGTATCTCAATTCCTAAAAGGAATT
GGCTGGGAAGTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATACAGTTGAATCCTTCTTAACAGTCTGCTTTA
CGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGAT
CTTCCTTGCGCCAGTCCCGAGTTTTTTTCTCGTCCCGGAATTCGGCACCA
ATTGTTATTAGACGCGTTCTCATGACCGGCCAGGAAAGACGCAACAAACC
AGAATCTTCTGCGGCAAAGCTCTATTGCTTACATCTTCAGGAGCCAGAGT
GCAAGAAGCAAGATATAGAGAAAACGAAACCCCGTCCCTATTAAGGAGAA
TTATCCTTCGCCTCGGACGTGTCACTCCCTGATTGGCTGCAGCCCATCGG
CCGAGTTGACGTCACGGGGAAGGCAGAGTACAAGTAGTCACAAAATACCC
TTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGC
GCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACAGGGATGGGGAC
ACAAACCCATTCTCAAAATATTAACTAAATTGTTCCTGTCTAAAGAACAT
ATTGGAACAAATAGTGGAGCAGAGATTGAAGGAAAGGCTTACTCACCTGG
GGATCTCTTCCATATGCTGATTCTTATCCCATAAGTTTTGTTGTGTCCTG
ATATGATTGCTGAACTGACTCTGTTTTAGTTGCCTCTCCGAAAGTTTTTT
AT

Query= MSMg01no380_e04.b1 MSMg01no380_e04.b1 CHROMAT_FILE:
MSMg01no380_e04.b1 PHD_FILE: MSMg01no380_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:17 2005
         (484 letters)



>mm_chr6_20531213_20532096
          Length = 884

 Score =  920 bits (476), Expect = 0.0
 Identities = 482/484 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaaggttgctggatgaaaaccaccagtgaagggctgttctttctgtgctcaattctcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaaggttgctggatgaaaaccaccagtgaagggctgttctttctgtgctcaattctcca 260

                                                                       
Query: 61  agctcaaattccttgaaaggctgaatgcactagcattttatccaagttctataagataat 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 agctcaaattccttgaaaggctgaatacactagcattttatccaagttctataagataat 320

                                                                       
Query: 121 ataagttgtataattttgctcctaaaatcaataataaccgtgcttttaagatgttgcccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataagttgtataattttgctcctaaaatcaataataaccgtgcttttaagatgttgcccc 380

                                                                       
Query: 181 aaattactcttgaataattattctattctagcctttgaattactatatcctacttttaca 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaattaatcttgaataattattctattctagcctttgaattactatatcctacttttaca 440

                                                                       
Query: 241 tatatttgtattttaagtattaacatttgaaaaataaatttaattgccttacatttacta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatttgtattttaagtattaacatttgaaaaataaatttaattgccttacatttacta 500

                                                                       
Query: 301 cagatattcagtaaacttgtaataaaaatcccaaaatattttgaaaaactcagaaaattg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagatattcagtaaacttgtaataaaaatcccaaaatattttgaaaaactcagaaaattg 560

                                                                       
Query: 361 gaaatgattcttcttctatataaagacccagctataccactactagaatatacccaaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaatgattcttcttctatataaagacccagctataccactactagaatatacccaaaag 620

                                                                       
Query: 421 atgctccagcataccccaaggaaatgtgctgcactaagttcacagaagctttattcataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgctccagcataccccaaggaaatgtgctgcactaagttcacagaagctttattcataa 680

               
Query: 481 tagc 484
           ||||
Sbjct: 681 tagc 684


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space:   414276
Effective search space used:   414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)