Query= MSMg01no384_e07.b1 MSMg01no384_e07.b1 CHROMAT_FILE:
MSMg01no384_e07.b1 PHD_FILE: MSMg01no384_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:32 2005
(473 letters)
>mm_chr6_61850498_61851371
Length = 874
Score = 895 bits (463), Expect = 0.0
Identities = 469/471 (99%), Gaps = 1/471 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgtaagagcttatattcccttatagatgttgatcttccaccctgttttc-aat 62
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 674 ggaattctgtaagagcttatattcccttatagatgttgatcttccaccctgttttcaaat 615
Query: 63 atgtttttcaaagcatctctactctccaaagagaaatatgtgaaagtgttttttaagcca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 atgtttttcaaagcatctctactctccaaagagaaatatgtgaaagtgttttttaagcca 555
Query: 123 taagatttttcatatttatgaatctagctacagacatgtatcctgaaggaagtgccttta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 taagatttttcatatttatgaatctagctacagacatgtatcctgaaggaagtgccttta 495
Query: 183 atatgttctgacgtctcaaaaatagcccagagttgggaaatattctaagcagtgaagaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atatgttctgacgtctcaaaaatagcccagagttgggaaatattctaagcagtgaagaaa 435
Query: 243 actctcagacttcctcctatctctgaaaatattatgcatgagtggaacaaaatatagagt 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 434 actctcagacttcctcctatctctgaaaatattatgcacgagtggaacaaaatatagagt 375
Query: 303 aacatgacaacaatacaggatgtgcttggaattcagtttctttgggttgatgtagtccaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aacatgacaacaatacaggatgtgcttggaattcagtttctttgggttgatgtagtccaa 315
Query: 363 gacagagacacaaagctaaaagcaagtgatcagtcatctgagtggaggaggaagttgtgt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gacagagacacaaagctaaaagcaagtgatcagtcatctgagtggaggaggaagttgtgt 255
Query: 423 tatgacttgcttttttgataaacctgagtcaaggtatgtttttcctagtct 473
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tatgacttgcttttttgataaacctgagtcaaggtatgtttttcctagtct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 874
Length adjustment: 10
Effective length of query: 463
Effective length of database: 864
Effective search space: 400032
Effective search space used: 400032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_e07.g1 MSMg01no384_e07.g1 CHROMAT_FILE:
MSMg01no384_e07.g1 PHD_FILE: MSMg01no384_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:32 2005
(495 letters)
>mm_chr6_61655506_61656400
Length = 895
Score = 919 bits (475), Expect = 0.0
Identities = 490/495 (98%)
Strand = Plus / Plus
Query: 1 atgtgctgaagttacattgcctcgtatcaaagtattaagaactaggctactgaaagttaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtgctgaagttacattgccttgtatcaaagtattaagaactaggctactgaaagttaa 260
Query: 61 gcctggtggaatataattagactataaggctttcctctcttgaatgactgggccaggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctggtggaatataattagactataaggctttcctctcttgaatgactgggccaggcct 320
Query: 121 ggtaggagtatattagttcccatgagcacttgagtataaagaaaggcttccctccctagt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ggtaggagtatattagttcccatgagcacttgagtataaagaaagacttccctccctagt 380
Query: 181 ttcttgtttgccatattattctatatattctccctacaatgtgttatcattgtcccaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcttgtttgccatattattctatatattctccctacaatgtgttatcattgtcccaaga 440
Query: 241 caattatctaaatatagaatgtgctgggaccttgttctttatctttcagaactgagctac 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caattatctaaatatagaacgtgctgggaccttgttctttatctttcagaactgagctac 500
Query: 301 atttcttttctttataaatatctagtttcatataagttgtcatggaaaccaaatattcac 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 atttcttttctttataaatatctagtttcatataagttgtcatggaaaccaaatatgcac 560
Query: 361 caagacagttaatattattcatgtccgctattcacatattttttgaaggaagcttgcatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caagacagttaatattattcatgtccgctattcacatattttttgaaggaagcttgcatg 620
Query: 421 ttgctaattgtgctattggcaactcactagtttatttccagtacgttttagcacaatctg 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgctaattgtgctattggcagctcactagtttatttccagtacgttttagcacaatctg 680
Query: 481 taatatggactttct 495
|||||||||||||||
Sbjct: 681 taatatggactttct 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|