Query= MSMg01no384_i15.b1 MSMg01no384_i15.b1 CHROMAT_FILE:
MSMg01no384_i15.b1 PHD_FILE: MSMg01no384_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:51 2005
(512 letters)
>mm_chr6_53764644_53765556
Length = 913
Score = 638 bits (330), Expect = 0.0
Identities = 382/410 (93%), Gaps = 22/410 (5%)
Strand = Plus / Minus
Query: 10 aattcagttcc---ttaccacagttaggtctggtctgtagtgtgaacctcacacagtagg 66
||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 406 aattcagttccaaa--accacagttaagtctggtctgtagtgtgaacctcacacaatagg 349
Query: 67 tgactgcttctgccaggcagaggatgtctcagtactgccaggtgacaagcaggatggtag 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tgactgcttctgccaggcagaggatgtctcagtactgccaggtgacaagcaggatggtag 289
Query: 127 ggtgtggtcaagacaattgtgctcatttgtcacacacctgattttcaccaaaggccaaca 186
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gatgtggtcaaggcaattgtgctcatttgtcacacacctgattttcaccaaaggccaaca 229
Query: 187 cgactgggtgactactatgttaaagaggcat-------------t-ta-atatatatata 231
||||||||||||||||||||||||||||||| | || |||||||||||
Sbjct: 228 cgactgggtgactactatgttaaagaggcatatatatatatatatatatatatatatata 169
Query: 232 tatatattcactgtcattgtcttcagacacatcagaagagggcacccctttcccattaca 291
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 168 tatatattcactgt--ttgtcttcagacacatcagaagagggcaccccaatcccattaca 111
Query: 292 gatggttgtgagccactatgtggttgctgggaattgaactcaggacctctggaagaacag 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gatggttgtgagccactatgtggttgctgggaattgaactcaggacctctggaagaacag 51
Query: 352 tcagtgctttcaactggtgagccatcttccagcacccccccttctctttt 401
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 tcagtgctttcaactggtgagccatcttccagcacccccccttctctttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 913
Length adjustment: 10
Effective length of query: 502
Effective length of database: 903
Effective search space: 453306
Effective search space used: 453306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_i15.g1 MSMg01no384_i15.g1 CHROMAT_FILE:
MSMg01no384_i15.g1 PHD_FILE: MSMg01no384_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:51 2005
(441 letters)
>mm_chr6_53610592_53611432
Length = 841
Score = 837 bits (433), Expect = 0.0
Identities = 439/441 (99%)
Strand = Plus / Plus
Query: 1 aaagatgaactttaatgctaaacttcacacacagggctcacagaacccaaacacctgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagatgaactttaatgctaaacttcacacacagggctcacagaacccaaacacctgagg 260
Query: 61 ctcgctgaatccaaaatgtcttaggttataaaaatgcattttaatccaaccgttctctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcgctgaatccaaaatgtcttaggttataaaaatgcattttaatccaaccgttctctta 320
Query: 121 cctgtaaataaacttcttattcatgtcaacctgacactatgcggccataaacacttgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgtaaataaacttcttattcatgtcaacctgacactatgcggccataaacacttgtga 380
Query: 181 gaatttttaaccccacactgctgaaatctttttactaaccaccttttggggatgtgaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatttttaaccccacactgctgaaatctttttactaaccaccttttggggatgtgaaga 440
Query: 241 gattctacaggggatcaccatattggtcttgccgtcacaagatataattgtcacagggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattctacaggggatcaccatattggtcttgccgtcacaagatataattgtcacagggag 500
Query: 301 tttataaagtcctgggagaacactcagcagcagcagaagcccccaaacaacacacttaac 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 tttataaagtcctgggagaacactcagcagcagcacaagcccccaaacaacacacttaac 560
Query: 361 aagaaaacttgaacacacggagaaacaagaatggcaaattcagcactaagatacgtcatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaaaacttgaacacacggagaaacaagaatggcaaattcagcactaagatacgtcatc 620
Query: 421 tttgaagtcaattggttttgg 441
|||||| ||||||||||||||
Sbjct: 621 tttgaaatcaattggttttgg 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
