Query= MSMg01no387_b06.b1 MSMg01no387_b06.b1 CHROMAT_FILE:
MSMg01no387_b06.b1 PHD_FILE: MSMg01no387_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:01 2005
(416 letters)
>mm_chr6_19975119_19975933
Length = 815
Score = 766 bits (396), Expect = 0.0
Identities = 408/412 (99%), Gaps = 1/412 (0%)
Strand = Plus / Minus
Query: 5 gaattcaatcacttttacgaacttcatatgaacctaaattttatatgtcctggtatgtct 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gaattcaatcacttttatgaacttcatatgaacctaaattttatatgtcctggtatgtct 556
Query: 65 tgccagaattcatgaatcacatctcaattgtaaatatgttcaaatccaagttatactatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgccagaattcatgaatcacatctcaattgtaaatatgttcaaatccaagttatactatg 496
Query: 125 ccattcatttacaacattcatgtccctctcaagacctaatgcatccttttaatcattcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ccattcatttacaacattcatgtccctctcaagacctaatgcatccttttaatcattcaa 436
Query: 185 aatatgatgaaattttaacaatttacccaaagtattaaaaacaactttcttgtttagctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aatatgatgaaattttaacaatttacccaaagtattaaaaacaactttcttgtttagctc 376
Query: 245 tgatactcttggtacattttatttaaaaaatatagtttcaatacctgtgccatttgttta 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 375 tgatactcttggtacattttattt-aaaaatatagtttcaatacctgtgccatttgttta 317
Query: 305 ggtggtccatggctatactgtaatagaatcctctaatcttgtcttttgtataagaaaaca 364
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggtggttcatggctatactgtaatagaatcctctaatcttgtcttttgtataagaaaaca 257
Query: 365 aattaatctgagaaatagttgatgacacctgatgtatgactagcaaaatcat 416
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aattaatctgataaatagttgatgacacctgatgtatgactagcaaaatcat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 815
Length adjustment: 9
Effective length of query: 407
Effective length of database: 806
Effective search space: 328042
Effective search space used: 328042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_b06.g1 MSMg01no387_b06.g1 CHROMAT_FILE:
MSMg01no387_b06.g1 PHD_FILE: MSMg01no387_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:01 2005
(463 letters)
>mm_chr6_19796100_19796962
Length = 863
Score = 890 bits (460), Expect = 0.0
Identities = 460/460 (100%)
Strand = Plus / Plus
Query: 4 ctatgtagagatcctcctgtcttgtgtcttgatatccttggtcaattcaaatcagcctta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctatgtagagatcctcctgtcttgtgtcttgatatccttggtcaattcaaatcagcctta 263
Query: 64 tttatttatttattcatgcctgccctatatttattcatgcctgccctatatttatatttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttatttatttattcatgcctgccctatatttattcatgcctgccctatatttatatttt 323
Query: 124 tatttggcaatgatctctacatagtagactcttttactatgagattgaacctttgtgtgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tatttggcaatgatctctacatagtagactcttttactatgagattgaacctttgtgtgg 383
Query: 184 ttcctttattttctcagatgcccttctaatgggtgctcactctgcatatccaagggagaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcctttattttctcagatgcccttctaatgggtgctcactctgcatatccaagggagaa 443
Query: 244 tctcaactccaaccatgtagaataggattatgctccactcactgctatatgtggcattct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctcaactccaaccatgtagaataggattatgctccactcactgctatatgtggcattct 503
Query: 304 tactatgaatttcttttttatgtaaagtgttgcagaacattgtttcactctctgcaggaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tactatgaatttcttttttatgtaaagtgttgcagaacattgtttcactctctgcaggaa 563
Query: 364 gtggtcttacagttttagtgtacaatatgtcatttgctaaaaaattattttaatctaata 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtggtcttacagttttagtgtacaatatgtcatttgctaaaaaattattttaatctaata 623
Query: 424 tttgtttattctcctgatcactgtgtcatactatttgaga 463
||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttgtttattctcctgatcactgtgtcatactatttgaga 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
