Query= MSMg01no389_j13.b1 MSMg01no389_j13.b1 CHROMAT_FILE:
MSMg01no389_j13.b1 PHD_FILE: MSMg01no389_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:15 2005
(134 letters)
>mm_chr6_111832996_111833529
Length = 534
Score = 207 bits (107), Expect = 2e-58
Identities = 119/123 (96%)
Strand = Plus / Plus
Query: 1 tggattttggaaatgaatgctatgaaatggtgtcttctgaacatcatggcatggctattt 60
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 201 tggattttggaaatgaatgctatgaaatggtgtcttctgagcatcatgacatggctattt 260
Query: 61 cactcaaatgtgcacagcagcataaaatagagccagccaaaattctggcacaggtaattg 120
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 cactcaattgtgcacagcagcataaaatagagccagccaaaattctgacacaggtaattg 320
Query: 121 gga 123
|||
Sbjct: 321 gga 323
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 534
Length adjustment: 8
Effective length of query: 126
Effective length of database: 526
Effective search space: 66276
Effective search space used: 66276
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no389_j13.g1 MSMg01no389_j13.g1 CHROMAT_FILE:
MSMg01no389_j13.g1 PHD_FILE: MSMg01no389_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:15 2005
(508 letters)
>mm_chr6_112038188_112039095
Length = 908
Score = 814 bits (421), Expect = 0.0
Identities = 499/555 (89%), Gaps = 47/555 (8%)
Strand = Plus / Minus
Query: 1 aggggcctcatgcttgtaaaataagctttttgtccattcagccatctccccagcccaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 aggggcctcatgcttgtaaaataagctttttgtccattcagccatctcctcagcccaaat 502
Query: 61 tatccttatttataattccgtga------------------------------------a 84
||||||||||||||||||||||| |
Sbjct: 501 tatccttatttataattccgtgaatatatatatatatatatatatatatatatatatata 442
Query: 85 tatatatatatacatatatatgcatttttaaaatttttctttaaactagggagaatgctt 144
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatatatatatatatatatgcatttttaaaatttttctttaaactagggagaatgctt 382
Query: 145 caaatctgttcccttaccatgtattattgagttatcatagctaactctatgtttattttc 204
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaatctgttcccttactatgtattattgagttatcatagctaactctatgtttattttc 322
Query: 205 cttccctttttaaatatatacacctaattatata-----------tatatcatgttttgc 253
|||||||||||||||||||| ||||||||||||| ||||||||| |||
Sbjct: 321 cttccctttttaaatatatatacctaattatatatataaataatttatatcatggcgtgc 262
Query: 254 ctctcagaggccatgcatatagcaaatagatagagatgtacagggaagaagaaatatctt 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctcagaggccatgcatatagcaaatagatagagatgtacagggaagaagaaatatctt 202
Query: 314 cccccaaagctcgggttcagagctgttaagacaggctatctgagtcaagaatccagattt 373
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 201 cccccaaagctcgggttcagaactgttaagacaggctatctgagtcaagaatccagatat 142
Query: 374 tcaatttcttggtagtgcagccacaaatctaagtaactactttgcagaatagaatcaatt 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tcaatttcttggtagtgcagccacaaatctaagtaactactttgcagaatagaatcaatt 82
Query: 434 gaactttggaattctaaaagtccaaactcggcttgaatgacttgccacctgctttgatgc 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gaactttggaattctaaaagtccaaactcggcttgaatgacttgccacctgctttgatgc 22
Query: 494 atcaattgtgatgtc 508
|||||||||||||||
Sbjct: 21 atcaattgtgatgtc 7
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
