Query= MSMg01no390_g21.b1 MSMg01no390_g21.b1 CHROMAT_FILE:
MSMg01no390_g21.b1 PHD_FILE: MSMg01no390_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:20 2005
(451 letters)
>mm_chr6_117761883_117762731
Length = 849
Score = 837 bits (433), Expect = 0.0
Identities = 446/451 (98%), Gaps = 2/451 (0%)
Strand = Plus / Minus
Query: 1 tggaaagatcttcctgagacaacttaggataaagaacaaaaggcacaactaagcttcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tggaaagatcttcctgagacaacttaggataaagaacaaaaggcacaactaagcttcact 590
Query: 61 aaaatatcctttaaaagagtgtttaagttaattctttattagtcagtcagcaatgagaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 589 aaaatatcctttaaaagagtgtttaagttaattctttattagtcagtcagcaat--gaga 532
Query: 121 gagcccagggcctcagcccagaggctgaggtaatattgatgcctccccagggacaggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gagcccagggcctcagcccagaggctgaggtaatattgatgcctccccagggacaggaga 472
Query: 181 gcagagtggcctcagggaaacttaaggtggaaggatccattttgggtgctggtgagaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gcagagtggcctcagggaaacttaaggtggaaggatccattttgggtgctggtgagaggc 412
Query: 241 atgaagtgatgtctaggagacagggccttcaggggagggctgccttgtgaggtcccaagc 300
|||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 411 atgaggtaatgtctaggagacagggccttcaagggagggctgccttgtgaggtcccaagc 352
Query: 301 tgtggtcttcagttaccagttcatcagagatgccaggttctctaacagtctcagtcttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgtggtcttcagttaccagttcatcagagatgccaggttctctaacagtctcagtcttgg 292
Query: 361 tctctgtgggcccagtctgggctgagcctgtcattccactgcaaactcctccttacctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tctctgtgggcccagtctgggctgagcctgtcattccactgcaaactcctccttacctgt 232
Query: 421 cagtttccacagctgccgcatctgcctccag 451
|||||||||||||||||||||||||||||||
Sbjct: 231 cagtttccacagctgccgcatctgcctccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 849
Length adjustment: 10
Effective length of query: 441
Effective length of database: 839
Effective search space: 369999
Effective search space used: 369999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_g21.g1 MSMg01no390_g21.g1 CHROMAT_FILE:
MSMg01no390_g21.g1 PHD_FILE: MSMg01no390_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:20 2005
(447 letters)
>mm_chr6_117601879_117602725
Length = 847
Score = 818 bits (423), Expect = 0.0
Identities = 441/447 (98%)
Strand = Plus / Plus
Query: 1 cttctacgttatctagaaccttcatctgcaaatagcactgaaaagaatctgatgggtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctacgttatctagaaccttcatctgcaaatagcactgaaaagaatctgatgggtaaa 260
Query: 61 ggaaacacgggagtggcaggaggtggcgagtgagtgctcttaaaaacaccattgcttgct 120
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 261 ggaaacacgggagtggcaggaggtggcgagtgagtactcttaaaaacaccactgcttgct 320
Query: 121 ggctcccattaggaaacctctgggaagggagagcccagcctcctctgggcaggctggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggctcccattaggaaacctctgggaagggagagcccagcctcctctgggcaggctggaaa 380
Query: 181 gggctctctgtgattatagcaagctccacctaaggggaaatagagaggtcttgagagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggctctctgtgattatagcaagctccacctaaggggaaatagagaggtcttgagagtca 440
Query: 241 tccaaaccagcttgtgggaaagactgctaaacaccagcccagcccttccttctatctgtt 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tccaaaccagcatgtgggaaagactgctaaacaccagcccagcccttccttctacctgtt 500
Query: 301 caggaacagctctgcgtcctccagtgcaggcttaggcccctagcctagagtttcattttg 360
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 caggaacagctctgcttcctccagtgcaggcttagccccctagcctagagtttcattttg 560
Query: 361 ttctgttcatttggcgggtggagggagtgaaacagagctttgtgtagcctagcctaccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgttcatttggcgggtggagggagtgaaacagagctttgtgtagcctagcctaccct 620
Query: 421 ccccaatgctagaattataggcctgca 447
|||||||||||||||||||||||||||
Sbjct: 621 ccccaatgctagaattataggcctgca 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
