Query= MSMg01no391_h19.b1 MSMg01no391_h19.b1 CHROMAT_FILE:
MSMg01no391_h19.b1 PHD_FILE: MSMg01no391_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:43 2005
(402 letters)
>mm_chr6_146691045_146691847
Length = 803
Score = 750 bits (388), Expect = 0.0
Identities = 399/406 (98%), Gaps = 7/406 (1%)
Strand = Plus / Plus
Query: 1 gaaatccagatttctgtatctgatgactggactgtgcctctgtgtattctagggtgggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaatccagatttctgtatctgatgactggactgtgcctctgtgtattctagggtgggtt 260
Query: 61 ctcttgtcattctccttgagatacaaaattgctcctgtgctttgttttttgttttctgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcttgtcattctccttgagatacaaaattgctcctgtgctttgttttttgttttctgac 320
Query: 121 agccccatcccagggtgtcagagctgttgaacctgcttgctttggaagaacttaattgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccccatcccagggtgtcagagctgttgaacctgcttgctttggaagaacttaattgta 380
Query: 181 gacattctgagagctaacacagcagaaagtttgacagtttctctgtgtgtgaaatggata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacattctgagagctaacacagcagaaagtttgacagtttctctgtgtgtgaaatggata 440
Query: 241 ctaggaaatttaca----cagtccagcttccttgtcttcatagccggccttgttttccta 296
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaggaaa---acaaacacagtccagcttccttgtcttcatagccggccttgttttccta 497
Query: 297 gtactcatttcatcacgcatggtacctatcagattttctgcagtactaggattcatgact 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtactcatttcatcacgcatggtacctatcagattttctgcagtactaggattcatgact 557
Query: 357 ctgggaacctgactttggagctgggcatggtgttgtacatccatga 402
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctgggaacctgactttggagctgggcatggtgttgtacatccatga 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 803
Length adjustment: 9
Effective length of query: 393
Effective length of database: 794
Effective search space: 312042
Effective search space used: 312042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_h19.g1 MSMg01no391_h19.g1 CHROMAT_FILE:
MSMg01no391_h19.g1 PHD_FILE: MSMg01no391_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:43 2005
(468 letters)
>mm_chr6_146835346_146836213
Length = 868
Score = 882 bits (456), Expect = 0.0
Identities = 465/468 (99%)
Strand = Plus / Minus
Query: 1 tcccagttgtgagataggggctgtgggctgaactcaagtgtttctgcaaaaagagcagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 tcccagttgtgagataggggctgtgggctgaactcaagtgtttctgcaaaaagagcagaa 701
Query: 61 gaggttaactgtttggccatctcttcaggccctatgctgaactttttaagtcccataagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gaggttaactgtttggccatctcttcaggccctatgctgaactttttaagtcccataagg 641
Query: 121 cttctgttttgatgcacaactgaaaagggagaaccctcacaactgagttcaaaccacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cttctgttttgatgcacaactgaaaagggagaaccctcacaactgagttcaaaccacatg 581
Query: 181 ataataattactgttgaaccaattgcagtgactgagctaacaattaagaattaactacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ataataattactgttgaaccaattgcagtgactgagctaacaattaagaattaactacta 521
Query: 241 tttactctttgttggatatcagctgtgtaatcctcttggctgcaaagtcagggagattct 300
||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tttaccctctggtggatatcagctgtgtaatcctcttggctgcaaagtcagggagattct 461
Query: 301 caggagcccttctttcagtttcccctgtcagacccagaactgaactgaataatgaaaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 caggagcccttctttcagtttcccctgtcagacccagaactgaactgaataatgaaaagc 401
Query: 361 agctttatggatacagaatatgattagtttctgttagctttttgttggctatgagcctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agctttatggatacagaatatgattagtttctgttagctttttgttggctatgagcctcc 341
Query: 421 ccagcccccaccgccgccgctgccaccaccctggggaacggaaggtgg 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ccagcccccaccgccgccgctgccaccaccctggggaacggaaggtgg 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
