Query= MSMg01no392_f01.b1 MSMg01no392_f01.b1 CHROMAT_FILE:
MSMg01no392_f01.b1 PHD_FILE: MSMg01no392_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:48 2005
(531 letters)
>mm_chr6_36618744_36619674
Length = 931
Score = 996 bits (515), Expect = 0.0
Identities = 527/531 (99%)
Strand = Plus / Plus
Query: 1 gaaggatggggaataggaggaaccattagaaagtcttggatactagggattccaggggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaggatggggaataggaggaaccattagaaagtcttggatactagggattccaggggct 260
Query: 61 cctaggacccaaaggggataactttagccaaaatgcctaatagtggaagatagaacctga 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 cctaggacccaaaggggataactttagccaaaatgcctaatagtggaaaatagaacctga 320
Query: 121 agaaactgctcccagtagataggcatggcccatcttgggatccaacccatctacagacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaactgctcccagtagataggcatggcccatcttgggatccaacccatctacagacac 380
Query: 181 caaaccccaacactattgctgatgccaagatgtgcttgcagacaggagcctggtatggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaccccaacactattgctgatgccaagatgtgcttgcagacaggagcctggtatggct 440
Query: 241 ctcctctgagagactctgccagcaccagactaagacagatgcagatattcacatccctct 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcctctgagagactttgccagcaccagactaagacagatgcagatattcacatccctct 500
Query: 301 gtttgactctgcctcaccacaatgaccagcaagaatgttcattgctattacatgattctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttgactctgcctcaccacaatgaccagcaagaatgttcattgctattacatgattctg 560
Query: 361 ttgccaggtaaactagaagtcttactgaaattttcatccaattctaggtgacataatgtg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 ttgccaggtaaactagaagtcttactgaaattttcatccaattctaggtgacataatgag 620
Query: 421 gagatgttagtggagatagcagattagctgtaccttttaatgcaacatagactaaaacag 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagatgttagtggagagagcagattagctgtaccttttaatgcaacatagactaaaacag 680
Query: 481 ccaaaaatatcaccacaaaatatgtaaactagattctagcatgtgatacaa 531
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccaaaaatatcaccacaaaatatgtaaactagattctagcatgtgatacaa 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_f01.g1 MSMg01no392_f01.g1 CHROMAT_FILE:
MSMg01no392_f01.g1 PHD_FILE: MSMg01no392_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:48 2005
(333 letters)
>mm_chr6_36825448_36826180
Length = 733
Score = 619 bits (320), Expect = 0.0
Identities = 323/324 (99%), Gaps = 1/324 (0%)
Strand = Plus / Minus
Query: 1 agtgctcaaagcaaatgatttaacctatgacctgggagttaatgtggatccttcctacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agtgctcaaagcaaatgatttaacctatgacctgggagttaatgtggatccttcctacct 384
Query: 61 gtgttctaacaaagcaacatgcatcatgatggcatggcatcctgtttgactcctaatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtgttctaacaaagcaacatgcatcatgatggcatggcatcctgtttgactcctaatatt 324
Query: 121 gatttctctagacttgaaacctttggatgcaccatataagcacaattatatttccaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gatttctctagacttgaaacctttggatgcaccatataagcacaattatatttccaaggg 264
Query: 181 atgtgaaacatctctgtgactcagaaattgacttgcaggtaaaactaatgccagtggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgtgaaacatctctgtgactcagaaattgacttgcaggtaaaactaatgccagtggagg 204
Query: 241 aggctctctctctctctctctctctctctctctctctctctctctctctctctctctctc 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aggctctctctc-ctctctctctctctctctctctctctctctctctctctctctctctc 145
Query: 301 tctctctctctctctctctctctc 324
||||||||||||||||||||||||
Sbjct: 144 tctctctctctctctctctctctc 121
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 135
Number of extensions: 54
Number of successful extensions: 54
Number of sequences better than 10.0: 1
Number of HSP's gapped: 50
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
