CCTCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCACAGCGATTGACGCAGCTTTCACAGTGCCTACATGTGTCTTCA
CTAGTTGAGATACGAGAGCTGAAAGAAGTAGACACATGTACCTTAAATCT
AACCCAAAAGCAACTTCTAATTGTTAATCACTGCAAATATAAATTCAGTT
GTTTTCAAGAGTGTCTCATGGTGGAAACAAGTTACTCTTACCGGTAGGCT
ACATGCTAGTAGATGACCAAAATAAAAATGAACTCAGTAGCTTCTTTGGA
GGTTCCTTGTCTTATGTCACATTAGGGTTATTCCTTAAAAAAAAAAATCT
TATTTTTATTTTCACTCACACACACACACACATGCACACAATGTATATGC
ATTTCTTTTTTTCTACCCCTACATGTCCTTTGTGTATACATTATGCCAGC
TTAGTGTTTTTATGGGATTCCTGGGTGTGTTAATGAGTGTCTCTATTTCT
TTTCTTTGATTCCTTCCTTTCTGATTGTTTGTTTTGATTAATTCCGATTG
CTTCTTTTTGCCTTACCTTATTTTCGAATCTTTTAATTATCCCCTAGAAC
GCTTTGATTTTTTATATGACACACCGTACCCATGATACTTGTTAAAAGCA
TACACCTTCTTAAAGTTCCCGTTTAAGGAATCTTAATTTCCACCATTCTT
TTCTTATACAAAATAAAACGCCTCTCTTTCCCTTCCCCCTCTCTCAGCCC
CACATTTTCACAACCTCCATTTTTCTCN

TTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATG
GCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAAT
GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTA
AGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGA
GGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTG
GAAATCAGTCTGGCGGTTCCTCAAAAAATTGGACATAGTACTACCGGAAG
ATCCAGCAATACCTCTTCTGGGCATATATTCAGAAGTTTCCCCAACAGGT
GAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGC
CAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGA
ATATGTGGCACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAAT
GAATTTATGAAATTCCTAGGCCAATGGATGGACCTGGAGGTCATCCACCT
GAGTGAGGTAACCCTTTCCAAAGGAACTCCCCCACATGTACCCACCTTTA
CGTGGCAATAACCCCAACCTAGGAATCCCATATAATCGAACCCCTTCGTT
ACTTCTGTATCTCTCCAAAAAGGAATATGGATGGCGGCATTCTTTCCCCC
CCTAAATATTGTACAAN

Query= MSMg01no394_b22.b1 MSMg01no394_b22.b1 CHROMAT_FILE:
MSMg01no394_b22.b1 PHD_FILE: MSMg01no394_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:23 2005
         (499 letters)



>mm_chr6_105485187_105486085
          Length = 899

 Score =  733 bits (379), Expect = 0.0
 Identities = 446/487 (91%), Gaps = 30/487 (6%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacagcgattgacgcagctttcacagtgcctacatgtgtcttcactagttgagat 64
           ||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 487 gaattcacagcgactgaggcagctttcacagtgcctacatgtgtcttcaccagttgagac 428

                                                                       
Query: 65  acgagagctgaaagaagtagacacatgtaccttaaatctaacccaaaagcaacttctaat 124
           | |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 427 atgagagctgaaagaagtagacacgtgtaccttaactctaacccaaaagcaacttctaat 368

                                                                       
Query: 125 tgttaatcactgcaaatataaattcagttgttttcaagagtgtctcatggtggaaacaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgttaatcactgcaaatataaattcagttgttttcaagagtgtctcatggtggaaacaag 308

                                                                       
Query: 185 ttactcttaccggtaggctacatgctagtagatgaccaaaataaaaatgaactcagtagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttactcttaccggtaggctacatgctagtagatgaccaaaataaaaatgaactcagtagc 248

                                                                       
Query: 245 ttctttggaggttccttgtcttatgtcacattagggttattcctt--aaaaaaaaaaatc 302
           ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||
Sbjct: 247 ttctttggaggttccttgtcttatggcacattagggttattccttaaaaaaaaaaaaatc 188

                                                                       
Query: 303 ttatttttattttcact----------------------------cacacacacacacac 334
           |||||||||||||||||                            |||||||||||||||
Sbjct: 187 ttatttttattttcactcacacacacacacacacacacacacacacacacacacacacac 128

                                                                       
Query: 335 atgcacacaatgtatatgcatttctttttttctacccctacatgtcctttgtgtatacat 394
           | |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 acgcacacaatgcatatgcttttctttttttctacccctacatgtcctttgtgtatacat 68

                                                                       
Query: 395 tatgccagcttagtgtttttatgggattcctgggtgtgttaatgagtgtctctatttctt 454
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  tatgccagcttagtgtttttatgggattcctgggtgtgttaatgagtgtctctatttctt 8

                  
Query: 455 ttctttg 461
           |||||||
Sbjct: 7   ttctttg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space:   434721
Effective search space used:   434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)