Query= MSMg01no395_a18.b1 MSMg01no395_a18.b1 CHROMAT_FILE:
MSMg01no395_a18.b1 PHD_FILE: MSMg01no395_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:45 2005
(475 letters)
>mm_chr6_37767292_37768167
Length = 876
Score = 615 bits (318), Expect = e-180
Identities = 339/348 (97%), Gaps = 6/348 (1%)
Strand = Plus / Minus
Query: 9 ggaattctcttgt---tcccaagctgaccttgcaataaaattcctgcctgcctctgagtg 65
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggaattctcttgtaga--ccaagctgaccttgcaataaaattcctgcctgcctctgagtg 288
Query: 66 tagaatcataggcctatagcaccatgcccagtccatattcattttattttattttgcttc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tagaatcataggcctatagcaccatgcccagtccatattcattttattttattttgcttc 228
Query: 126 tgaaatttttgtttgttggttttgtttttgagaaagggtttctctgtgtattcttggctg 185
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 227 tgaaatttttgttttttggttttgtttttgagaaagggtttctctatgtattcttggctg 168
Query: 186 tcctggaacttactatgtagagcacgcaggctggcctcaaactcagagatctgcttgcca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tcctggaacttactatgtagagcacgcaggctggcctcaaactcagagatctgcttgcca 108
Query: 246 tggcctcctgagtgctgggattaaaggaggtcactcatcattgccccacttgcaatgttt 305
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 107 tggcctcctgagtgctgggattaaaggagggcac-catcattgccccacttgcaatgttt 49
Query: 306 ttatcatacagaaatttaactcactgtctgtctgtctgtctgtctgtc 353
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 ttatcatacagaaatttaactcactgtctgtctgtctgtctgtctgtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 876
Length adjustment: 10
Effective length of query: 465
Effective length of database: 866
Effective search space: 402690
Effective search space used: 402690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_a18.g1 MSMg01no395_a18.g1 CHROMAT_FILE:
MSMg01no395_a18.g1 PHD_FILE: MSMg01no395_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:45 2005
(444 letters)
>mm_chr6_37611538_37612381
Length = 844
Score = 808 bits (418), Expect = 0.0
Identities = 436/442 (98%)
Strand = Plus / Plus
Query: 3 catagcgacacacattattcaaacatcagcagaaaaattacatgtacgtgcagggtgtcg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 catagcgacacacattattcaaacatcagcagaaaaattacatgtacgtgcagggtgtcg 262
Query: 63 gagttctgtgagttgttgactcagtttagatagccctgttgtgtcctcacattcctcttt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gagttctgtgagttgttgactcagtttagatagccctgttgtgtcctcacattcctcttt 322
Query: 123 atcttatggtcaagatggtcccaggaatgttttaactacggggcatacccgggtttgttt 182
|||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 323 atcttatggtcaagctgttcccaggaatgttttaactatggggcatacccgggtttgttt 382
Query: 183 ttctttattttcagccccaggcagcctctaggctcacaaacaaccagcaatttctgagta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttctttattttcagccccaggcagcctctaggctcacaaacaaccagcaatttctgagta 442
Query: 243 ctttatatgacttacaggtcttgaaatttcatctttctttcagtgccagctggttttggt 302
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 443 ctttatatgacttacaggtcttgaaatttcatctttctttcagtgcctgctggttctggt 502
Query: 303 ttgggtacctggctttacatagctcagacttcctttaaacttgctgtgcaacctgttttg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttgggtacctggctttacatagctcagacttcctttaaacttgctgtgcaacctgttttg 562
Query: 363 gacttaaactcttactcttcagacgaaacctctaaagtcctccagttttaggtacatatt 422
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 563 gacttaaactcttactcttcagacgaagcctctaaagtcctccagttttaggtacatatt 622
Query: 423 gtcaagtccaccttgaatttct 444
||||||||||||||||||||||
Sbjct: 623 gtcaagtccaccttgaatttct 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
