Query= MSMg01no395_o11.b1 MSMg01no395_o11.b1 CHROMAT_FILE:
MSMg01no395_o11.b1 PHD_FILE: MSMg01no395_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:53 2005
(389 letters)
>mm_chr6_32026088_32026873
Length = 786
Score = 632 bits (327), Expect = 0.0
Identities = 371/387 (95%), Gaps = 4/387 (1%)
Strand = Plus / Plus
Query: 1 ccctgctcctggtcattcactctcatcttttctatagcatagctctggaactctgccctg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctgctcctggtcattcactctaatcttttctatagcatagctctggaactctgccctg 260
Query: 61 aatccttctctgaattctagccgtttcttccaattctcctggatgcataaataccacata 120
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatc---ctctgaattctagccttttcttccaattctcctggatgcataaataccacatc 317
Query: 121 gcccacctcgtgagctgaaatacaagggtgctcaatctaggcagtgatcttcttttgata 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcccacctggtgagctgaaatacaagggtgctcaatctaggcagtgatcttcttttgata 377
Query: 181 ttaccatctcccctagcctttagcatagtgctttgtgtggtggtttgaaaaggaatgacc 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 378 ttaccatctcccctagcctttagcatagtgttttgtgtggtggtttgaaaaggaatgacc 437
Query: 241 ccc-attgtttcttatgtttgaatgcttggctatagggagtgccacttgttggaggaaat 299
||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ccccattgattcatatgtttgaatgcttggctatagggagtgccacttgttggaggaaat 497
Query: 300 atatcactgcagaggcagggttggagaggctttgaggtcttatttgcccccgctatgctc 359
|||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||
Sbjct: 498 atatcactgcagaggcagggttggggaggctttgaggtcttatttgctcaagctatgctc 557
Query: 360 attatcacactcagtccccttctgatg 386
|||||||||| ||||||||||||||||
Sbjct: 558 attatcacacacagtccccttctgatg 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 786
Length adjustment: 9
Effective length of query: 380
Effective length of database: 777
Effective search space: 295260
Effective search space used: 295260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_o11.g1 MSMg01no395_o11.g1 CHROMAT_FILE:
MSMg01no395_o11.g1 PHD_FILE: MSMg01no395_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:53 2005
(245 letters)
>mm_chr6_32192875_32193519
Length = 645
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Minus
Query: 1 ttctccagcagggaaagttcaggcttaggggagggcggaggtaactgcttcattagagag 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttctccagcagtgaaagttcaggcttaggggagggcggaggtaactgcttcattagagag 383
Query: 61 gataatctcattggagccactggcttgaataataaccccttgcagaggcctggggtcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gataatctcattggagccactggcttgaataataaccccttgcagaggcctggggtcttt 323
Query: 121 ctccctggagctgttagaacctctggtctagggctgtaagggcccagtgcacaggaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 322 ctccctggagctgttagaacctctggtctagggctgtaagggcccagtgcacaggaagta 263
Query: 181 gaatgagaataggagggaagactgctcagtaaggaagaccttaaatcagaggctaagggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaatgagaataggagggaagactgctcagtaaggaagaccttaaatcagaggctaagggg 203
Query: 241 ag 242
||
Sbjct: 202 ag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
