MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-397A03
Chromosome	6 (Build37)
Map Location	148,909,409 - 148,909,771
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Mlstd1, Ergic2, Tmtc1, 1110033J19Rik, EG622319, LOC100042984, LOC665372, Ipo8, Caprin2, EG665395, Tera
Downstream gene	LOC667138, D030011O10Rik, 4833442J19Rik, C730024G19Rik, 2810474O19Rik, LOC665426, LOC622481, LOC665441, Bicd1, LOC667182, LOC100039850
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ccdc91 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67015 MGI:1914265
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039712 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100039727 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100039736 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039736
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Mlstd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330450 MGI:2687035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ergic2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67456 MGI:1914706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tmtc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:387314 MGI:3039590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110033J19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66184 MGI:1913434
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	EG622319 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622319 MGI:3644722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100042984 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 41 ESTs

name	LOC665372 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Ipo8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320727 MGI:2444611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Caprin2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232560 MGI:2448541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665395 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665395 MGI:3644742
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 355 ESTs, 4 Proteins

name	Tera (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56306 MGI:1929091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667138 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667138
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 3 Proteins pseudo : _no_value

name	D030011O10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320560 MGI:2444273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4833442J19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320204 MGI:2443575
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C730024G19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232566 MGI:2442933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 2 Proteins

name	2810474O19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67246 MGI:1914496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665426 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins pseudo : _no_value

name	LOC622481 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 2 Proteins pseudo : _no_value

name	LOC665441 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665441
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Bicd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12121 MGI:1101760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667182 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 115 ESTs, 25 Proteins pseudo : _no_value

name	LOC100039850 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Ccdc91 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70980527 GeneID:67015 MGI:1914265
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 91 transcript_id : NM_025911.2

name	LOC100039712 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256052 GeneID:100039712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001473371.1

name	LOC100039727 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256054 GeneID:100039727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039727 transcript_id : XM_001473389.1

name	LOC100039736 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256056 GeneID:100039736
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100039736 transcript_id : XM_001473407.1

name	Mlstd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130627 GeneID:330450 MGI:2687035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : male sterility domain containing 1 transcript_id : NM_178797.3

name	Ergic2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366567 GeneID:67456 MGI:1914706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ERGIC and golgi 2 transcript_id : NM_026168.3

name	Ergic2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363692 GeneID:67456 MGI:1914706
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ERGIC and golgi 2 transcript_id : NM_026355.2

name	Tmtc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385673 GeneID:387314 MGI:3039590
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and tetratricopeptide repeat containing 1 transcript_id : NM_198967.2

name	LOC100042984 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256063 GeneID:100042984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 41 ESTs product : similar to gag protein transcript_id : XM_001479389.1

name	Ipo8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487444 GeneID:320727 MGI:2444611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : importin 8 transcript_id : NM_001081113.1

name	Caprin2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124107628 GeneID:232560 MGI:2448541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caprin family member 2 transcript_id : NM_181541.3

name	EG665395 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149256065 GeneID:665395 MGI:3644742
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 355 ESTs, 4 Proteins product : predicted gene, EG665395 transcript_id : XM_976637.2

name	Tera (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130638 GeneID:56306 MGI:1929091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : teratocarcinoma expressed, serine rich transcript_id : NM_019643.3

name	D030011O10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343027 GeneID:320560 MGI:2444273
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D030011O10 gene transcript_id : NM_177192.2

name	4833442J19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892656 GeneID:320204 MGI:2443575
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4833442J19 gene transcript_id : NM_177101.4

name	C730024G19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378362 GeneID:232566 MGI:2442933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 2 Proteins product : RIKEN cDNA C730024G19 gene, transcript variant 3 transcript_id : XM_901291.2

name	C730024G19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378364 GeneID:232566 MGI:2442933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 43 ESTs, 2 Proteins product : RIKEN cDNA C730024G19 gene, transcript variant 1 transcript_id : XM_132975.6

name	2810474O19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129885 GeneID:67246 MGI:1914496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810474O19 gene transcript_id : NM_026054.2

name	Bicd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347399 GeneID:12121 MGI:1101760
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bicaudal D homolog 1 (Drosophila) transcript_id : NM_009753.2

name	LOC100039850 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256059 GeneID:100039850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100039850 transcript_id : XM_001473661.1

name	Ccdc91 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532950 CCDS:CCDS20707.1 GeneID:67015 MGI:1914265
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence IPI] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : GGA binding partner protein_id : NP_080187.2

name	LOC100039712 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256053 GeneID:100039712
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473421.1

name	LOC100039727 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256055 GeneID:100039727
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473439.1

name	LOC100039736 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256057 GeneID:100039736
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473457.1

name	Mlstd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520289 GeneID:330450 MGI:2687035
definition	GO_component : GO:0005777 - peroxisome [Evidence IDA] GO_function : GO:0050062 - long-chain-fatty-acyl-CoA reductase activity [Evidence IDA] GO_process : GO:0010025 - wax biosynthesis [Evidence TAS] codon_start : 1 product : male sterility domain containing 1 protein_id : NP_848912.1

name	Ergic2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312962 CCDS:CCDS20708.1 GeneID:67456 MGI:1914706
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005793 - ER-Golgi intermediate compartment [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA] [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : PTX1 protein isoform 1 protein_id : NP_080444.1

name	Ergic2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66773206 CCDS:CCDS20709.1 GeneID:67456 MGI:1914706
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005793 - ER-Golgi intermediate compartment [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA] [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : PTX1 protein isoform 2 protein_id : NP_080631.1

name	Tmtc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39725721 GeneID:387314 MGI:3039590
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : ARG99 homolog protein_id : NP_945318.1

name	LOC100042984 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256064 GeneID:100042984
definition	codon_start : 1 product : similar to gag protein protein_id : XP_001479439.1

name	Ipo8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487445 GeneID:320727 MGI:2444611
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence ISS]; GO:0005488 - binding [Evidence IEA]; GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0000059 - protein import into nucleus, docking [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence ISS] codon_start : 1 note : ATP-binding cassette, sub-family C (CFTR/MRP), member 10; oocyte maturation 1 product : importin 8 protein_id : NP_001074582.1

name	Caprin2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124107629 GeneID:232560 MGI:2448541
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : C1q domain containing 1 product : caprin family member 2 protein_id : NP_853519.2

name	EG665395 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378346 GeneID:665395 MGI:3644742
definition	codon_start : 1 product : similar to 40S ribosomal protein S29 protein_id : XP_981731.1

name	Tera (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84993237 CCDS:CCDS20713.1 GeneID:56306 MGI:1929091
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : teratocarcinoma expressed, serine rich protein_id : NP_062617.2

name	D030011O10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893205 CCDS:CCDS20714.1 GeneID:320560 MGI:2444273
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC320560 protein_id : NP_796166.1

name	4833442J19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56711339 CCDS:CCDS20715.1 GeneID:320204 MGI:2443575
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006479 - protein amino acid methylation [Evidence IEA] codon_start : 1 product : hypothetical protein LOC320204 protein_id : NP_796075.2

name	C730024G19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83030567 GeneID:232566 MGI:2442933
definition	codon_start : 1 product : hypothetical protein isoform 3 protein_id : XP_906384.1

name	C730024G19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25050391 GeneID:232566 MGI:2442933
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_132975.2

name	2810474O19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61557468 CCDS:CCDS20717.1 GeneID:67246 MGI:1914496
definition	codon_start : 1 product : hypothetical protein LOC67246 protein_id : NP_080330.1

name	Bicd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859516 GeneID:12121 MGI:1101760
definition	codon_start : 1 exception : mismatches in translation product : bicaudal D homolog 1 protein_id : NP_033883.1

name	LOC100039850 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256060 GeneID:100039850
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473711.1

name	LOC665372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665372
definition	number : 1 pseudo : _no_value

name	LOC665441 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665441
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:235578
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179501
definition	standard_name : AW555238

name	(CDS detail)
type	STS
link
xref	UniSTS:159589
definition	standard_name : AU045683

name	(CDS detail)
type	STS
link
xref	UniSTS:159590
definition	standard_name : 32.MMHAP34FLC5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:122916
definition	standard_name : 08.MHAa92a8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:235576
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235580
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:208054
definition	standard_name : BB378162

name	(CDS detail)
type	STS
link
xref	UniSTS:165500
definition	standard_name : AW048109

name	(CDS detail)
type	STS
link
xref	UniSTS:161536
definition	standard_name : RH124714

name	(CDS detail)
type	STS
link
xref	UniSTS:235577
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:261225
definition	standard_name : AI104090

name	(CDS detail)
type	STS
link
xref	UniSTS:125469
definition	standard_name : MHAa97h3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130896
definition	standard_name : D6Mit340

name	(CDS detail)
type	STS
link
xref	UniSTS:130928
definition	standard_name : D6Mit372

name	(CDS detail)
type	STS
link
xref	UniSTS:130943
definition	standard_name : D6Mit390

name	(CDS detail)
type	STS
link
xref	UniSTS:110887
definition	standard_name : AU047054

name	(CDS detail)
type	STS
link
xref	UniSTS:164345
definition	standard_name : AV149826

name	(CDS detail)
type	STS
link
xref	UniSTS:162980
definition	standard_name : RH126272

name	(CDS detail)
type	STS
link
xref	UniSTS:249751
definition	standard_name : BI282073

name	(CDS detail)
type	STS
link
xref	UniSTS:164344
definition	standard_name : AI852444

name	(CDS detail)
type	STS
link
xref	UniSTS:210082
definition	standard_name : RH136087

name	(CDS detail)
type	STS
link
xref	UniSTS:208055
definition	standard_name : BE628502

name	(CDS detail)
type	STS
link
xref	UniSTS:161364
definition	standard_name : RH124542

name	(CDS detail)
type	STS
link
xref	UniSTS:471005
definition	standard_name : 2810474O19Rik

name	(CDS detail)
type	STS
link
xref	UniSTS:210329
definition	standard_name : RH136339

name	(CDS detail)
type	STS
link
xref	UniSTS:245769
definition	standard_name : BE105191

name	(CDS detail)
type	STS
link
xref	UniSTS:235581
definition

name	1110033J19Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149256047 GeneID:66184 MGI:1913434
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110033J19 gene pseudo : _no_value transcript_id : XR_035151.1

name	EG622319 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149256062 GeneID:622319 MGI:3644722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG622319 transcript_id : XR_035412.1

name	LOC667138 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149256066 GeneID:667138
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 3 Proteins product : similar to ribosomal protein L27 pseudo : _no_value transcript_id : XR_034200.1

name	LOC665426 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149256058 GeneID:665426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins product : similar to Transmembrane protein 183A pseudo : _no_value transcript_id : XR_031297.1

name	LOC622481 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149256067 GeneID:622481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 2 Proteins product : similar to BTB (POZ) domain containing 14B pseudo : _no_value transcript_id : XR_034225.1

name	LOC667182 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149256068 GeneID:667182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 115 ESTs, 25 Proteins product : similar to DnaJ (Hsp40) homolog, subfamily B, member 6 pseudo : _no_value transcript_id : XR_034227.1

clone name	MSMg01-179J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145F21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-442G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507A01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-458B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298N22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-330H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072K04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-397A03.T7 (MSMg01no397_a03.b1)	MSMg01-397A03.TJ (MSMg01no397_a03.g1)
ACC	AG497448	AG497449
length	750	734
length of high quality (start - end)	370 (48 - 417)	485 (78 - 562)
definition	CHROMAT_FILE: MSMg01no397_a03.b1 PHD_FILE: MSMg01no397_a03.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:09:17 2005	CHROMAT_FILE: MSMg01no397_a03.g1 PHD_FILE: MSMg01no397_a03.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:09:17 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC GGAATTCACATTAACTGACTTGACAGCAAGTGTTTTTACCATGAGCTATC TCGCCTGCCCAGTGTAGTAACTTTCGATTTTAAATATTCTAGGCTTAATC CAATTGCCTTCAAGCTAGCATTTTGTCTACTTGGTGTTTATGGACAATTT CCTAGGAGAGGGCTTCCTCTTCTCAGTCTATAGCGTTATTATAAGTATAT TGAGACTGACAGTATAACTTCAGTGTGGTGGATGGTTCCCAAACACTAGT TCACTTTGTTCAAACGTAATCACTTTGCATTTCTGACCCATTCTGACAGC TGGCAAAGGACACAACAGAGAAATATATTTTTTTCTTTTTGGTGGGGGGT GGGGGGAGAACTGGNATGNNNNNNNNNNNNNNNTTTTTTTTTTTGNNTTG TTTTTTTTTTTTTTTTTGTTGTGGGTTTTGTTCTTTTTTTGTTGTNNTGT TTTTTTTTCTCTTTGTTGCTCTTCTCTCTCTCCCTCCTCGTTCTTTTTCG TTGCCTCCCCGTGTTTCTTTCCCTCCGTTTCCTTTCCTTTTTCTCGCCTT CCCCTTTTTCTTTTTCACCCTCCGCTTTTCTTTCTCTTCTCGCCTCCCCT AACCGCCTTATCTTTCCCCCTTCTCCTATTCCCCCTTCTTAAACACTTTG CCTATTTCCCCTGTTTCCCCTTTATTATACCTTTCCCTCCTTCCATTTTC	CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXTAATAAGTGAAAGTAAGATATGT ATAGGTTATGTATAGGTTAGCCAACATTACCAAACTAATTACTTTCCCAT TGCTATGACAAAATATGGTAACCAAAAACAACTTACAGAAGAAAGTTGTG GGTTTTTTAAATTAGTATTATTTTCTGGCTTACAGTTCCTGAGGGAGAGT CCAGAATGGCAGGGGAAACATGACAGAAGATGGCTAGAGCAGGAAGCTGA ATGACATCTTCAACAGCAAGGAGAAAGCAGAGAGAGCTAACTTTAAGCAA GGCTAGGATATAAACTTCTCATTCAAATCACAATTACCTTACCAGTTTTT CACTAAAAAAAAAATAATAATAATAATTAAAGATGGCCTTAAACTTGCTA TGTAGCCAAGGATAATTTTTTACTTCTGACATTCCTGCCTCTACTTCCAG AATACTGGGATTACAGATGTATATCATTACACCCAGTTTTATAGAGTGCT GGAGATTGTTGGTTTTTTGCCCCGCTTTTTCTCTTACTTCTTCTTCTTTT CTCCTCCCCTCCCCCTTTTTTTCCATCCTCCACTCTCCTTCCCCTTTTTT CATCTCCTCCTAATACCCCTACTCCTATCGTTTCCCCCCCCCTTCCATTA CTTTAATTCCCCATCTCTTTTTATATTCTCTTTC
quality values	Open. Hide. 0 3 7 6 8 9 12 12 28 25 37 41 41 41 39 43 37 36 37 33 35 30 28 28 35 44 48 30 28 31 30 23 19 23 9 9 9 13 12 19 19 15 14 14 16 27 29 31 59 48 57 35 35 35 31 31 31 33 33 30 30 25 12 9 9 11 12 12 18 28 28 29 29 31 31 33 36 47 50 53 57 57 57 57 57 57 57 57 57 57 50 50 50 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 57 57 68 57 57 57 59 68 68 68 68 57 57 54 57 57 57 57 57 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 59 57 59 59 59 59 57 68 68 68 68 68 68 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 59 57 43 43 43 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 57 57 54 47 47 47 47 59 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 48 59 59 59 57 57 59 59 59 57 57 48 48 48 48 47 46 46 43 32 23 15 3 0 3 18 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 20 22 34 27 19 16 10 10 10 9 3 0 0 3 8 6 6 6 9 7 9 9 13 10 18 11 11 11 17 13 11 6 6 6 6 6 6 6 6 6 6 8 6 6 6 6 6 10 15 15 13 11 9 8 8 8 8 8 6 6 3 0 0 3 8 8 8 7 8 8 8 6 9 7 11 8 10 10 9 11 11 11 9 7 7 8 6 8 8 10 19 19 14 19 17 8 7 7 10 10 10 10 8 8 6 6 8 8 10 10 10 11 17 13 8 8 8 8 10 10 10 10 11 9 9 8 10 8 8 8 8 8 6 6 8 8 9 12 9 6 6 6 6 6 7 8 8 6 6 8 8 12 12 15 12 8 9 10 10 8 7 7 9 10 10 17 14 10 9 9 9 12 9 11 10 11 9 9 9 9 17 11 14 14 15 13 9 8 8 8 8 10 10 14 13 18 13 10 8 8 8 8 8 14 16 13 8 8 8 8 8 10 9 9 13 10 8 8 8 8 8 8 13 13 10 10 10 10 12 10 8 8 11 10 8 8 8 8 10 15 10 8 8 8 8 11 10 10 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 6 6 8 8 9 6 8 8 10 8 8 8 8 8 8 8 10 10 9 11 12 12 8 8 12 12 12 11 11 11 8 8 8 8 8 8 8 10 8 8 9 9 8 8 8 8 8 8 8 8 8	Open. Hide. 6 6 6 8 15 10 8 8 8 8 8 9 9 9 15 16 34 37 43 37 37 41 41 39 39 39 39 39 44 44 39 25 22 8 6 6 6 8 8 19 15 21 21 33 26 48 48 50 53 47 47 50 47 47 50 50 57 57 57 53 43 43 21 19 24 19 26 23 24 24 27 21 42 42 42 50 50 59 59 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 68 68 68 68 68 57 57 68 68 68 68 68 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 62 68 68 62 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 62 43 43 43 35 24 24 17 19 26 43 43 62 62 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 52 52 57 57 59 59 57 57 57 59 59 59 57 57 68 68 68 57 57 57 57 54 57 59 59 57 57 52 52 43 44 59 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 59 59 54 54 54 57 57 57 57 43 43 46 57 57 57 44 44 36 36 28 40 40 57 59 57 57 57 57 57 57 57 57 57 40 38 25 25 22 36 36 50 47 47 54 59 59 59 59 59 59 57 57 57 59 59 57 54 54 47 47 48 48 59 57 47 39 28 28 20 20 20 32 32 57 43 48 48 48 48 41 46 46 43 47 43 39 31 32 41 43 39 37 33 30 30 33 37 39 39 39 43 30 30 17 17 17 28 28 36 36 37 43 39 39 35 39 39 34 34 28 28 23 26 26 26 26 14 22 24 20 20 23 21 22 28 28 28 28 34 26 21 15 10 10 10 10 10 10 9 8 8 11 8 8 8 8 10 8 10 10 10 19 17 12 10 13 11 11 11 15 12 8 8 8 8 8 8 10 8 10 11 10 8 8 8 8 10 8 10 12 17 15 20 10 10 8 8 10 12 10 8 8 6 6 8 8 8 8 8 9 9 11 11 12 13 19 19 19 14 9 9 8 10 10 15 23 18 11 8 10 8 8 8 8 8 6 6 8 8 9 8 8 8 8 8 9 12 10 8 8 6 6 6 6 6 8 8 6 6 8 8 8 8 9 11 11 19 16 18 18 14 14 10 15 11 8 8 8 8 8 8 13 10 10 10 12 12 13 8 8 8 6 8 8 11 11 11 10 10 10 8 7 7 8 8 12 15 21 20 23 23 32 25

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no397_a03.b1 MSMg01no397_a03.b1 CHROMAT_FILE:
MSMg01no397_a03.b1 PHD_FILE: MSMg01no397_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:17 2005
         (370 letters)



>mm_chr6_148909205_148909974
          Length = 770

 Score =  687 bits (355), Expect = 0.0
 Identities = 361/363 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacattaactgacttgacagcaagtgtttttaccatgagctatctcgcctgccca 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacattaacagacttgacagcaagtgtttttaccatgagctatctcgcctgccca 264

                                                                       
Query: 65  gtgtagtaactttcgattttaaatattctaggcttaatccaattgccttcaagctagcat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgtagtaactttcgattttaaatattctaggcttaatccaattgccttcaagctagcat 324

                                                                       
Query: 125 tttgtctacttggtgtttatggacaatttcctaggagagggcttcctcttctcagtctat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgtctacttggtgtttatggacaatttcctaggagagggcttcctcttctcagtctat 384

                                                                       
Query: 185 agcgttattataagtatattgagactgacagtataacttcagtgtggtggatggttccca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcgttattataagtatattgagactgacagtataacttcagtgtggtggatggttccca 444

                                                                       
Query: 245 aacactagttcactttgttcaaacgtaatcactttgcatttctgacccattctgacagct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aacactagttcactttgttcaaacgtaatcactttgcatttctgacccattctgacagct 504

                                                                       
Query: 305 ggcaaaggacacaacagagaaatatatttttttctttttggtggggggtggggggagaac 364
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 ggcaaaggacacaacagagaaatatttttttttctttttggtggggggtggggggagaac 564

              
Query: 365 tgg 367
           |||
Sbjct: 565 tgg 567


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space:   274721
Effective search space used:   274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information