Query= MSMg01no403_g09.b1 MSMg01no403_g09.b1 CHROMAT_FILE:
MSMg01no403_g09.b1 PHD_FILE: MSMg01no403_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:40 2005
(498 letters)
>mm_chr6_87484846_87485743
Length = 898
Score = 787 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Minus
Query: 1 caggactgaagctccacatggagctgctactaggatggtgctcaggggggctatcagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 caggactgaagctccacatggagctgctactaggatggtgctcaggggggctatcagata 352
Query: 61 gggaacagtgtgctgggccaggcaggaagtactgtagatcacagactccaaagtccccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gggaacagtgtgctgggccaggcaggaagtactgtagatcacagactccaaagtccccaa 292
Query: 121 gagcctgagccaaagttaaggaatccagcacccctgtggtaccgggtggcagctgggtaa 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 291 gagcctgagccaaagttaaggaatccagcacccctgtggcaccgggtggcagctgggtaa 232
Query: 181 gctaggcagtcccttttctctcattgctgtgtgtacttcctgtctctgtgttggtgtgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gctaggcagtcccttttctctcattgctgtgtgtacttcctgtctctgtgttggtgtgct 172
Query: 241 tgctcatgtgactcatgttggccaatgaaacataagcagagaagatgagcacagaggctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tgctcatgtgactcatgttggccaatgaaacataagcagagaagatgagcacagaggctt 112
Query: 301 gggatatatttattgttcatgtggtcctttagttctcagtgagaaggacacgccctgggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gggatatatttattgttcatgtggtcctttagttctcagtgagaaggacacgccctgggt 52
Query: 361 cagcacactcaggccccaggtgttcacattagtctgtgatgcctcttagag 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 cagcacactcaggccccaggtgttcacattagtctgtgatgcctcttagag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_g09.g1 MSMg01no403_g09.g1 CHROMAT_FILE:
MSMg01no403_g09.g1 PHD_FILE: MSMg01no403_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:40 2005
(454 letters)
>mm_chr6_87303275_87304127
Length = 853
Score = 832 bits (430), Expect = 0.0
Identities = 448/456 (98%), Gaps = 5/456 (1%)
Strand = Plus / Plus
Query: 1 cactctcatacaatattgttaatcaactggcttcaaagcgaggagatgttcttccagtgg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 cactctcatacaatattgttaatcaactggcttcaaagccaggagatgttcttccagtgg 260
Query: 61 cctggtgtggtgtgggtgtatgactactcagggagacgtaacattggcatctacctctta 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 cctggtgtggtgtgggtgtatgactactcagggagacgtaacattgacatctacctctta 320
Query: 121 tctgggatggcaactgaacaactcatacaagctcatcccaaggagaaaaatggatttatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgggatggcaactgaacaactcatacaagctcatcccaaggagaaaaatggatttatc 380
Query: 181 atgagtttcttatggagcagtggatgaccatacacagacaccatttccagaagttccctc 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 atgagtttcttatggagcagtggatgaccatacacagccaccatttccagaagttccctc 440
Query: 241 tctttctc--acatttctattttatagggctataagcctgcatcagaatcaatacaagtc 298
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tc---ctcccacatttctattttatagggctataagcctgcatcagaatcaatacaagtc 497
Query: 299 agggctcagggtgctacccaatgttggggtgccaggggtaaaagtaggctcagacatcac 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agggctcagggtgctacccaatgttggggtgccaggggtaaaagtaggctcagacatcac 557
Query: 359 aagcctggacaaagtaagactctgggaaagttgtttgtttaagggtaccttgactttgcc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aagcctggacaaagtaagactctgggaaagttgtttgtttaagggtaccttgactttgcc 617
Query: 419 cttcttagagattcttgtggtctcagaaaacactgt 454
||||||||||||||||||||||||||||||||||||
Sbjct: 618 cttcttagagattcttgtggtctcagaaaacactgt 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 853
Length adjustment: 10
Effective length of query: 444
Effective length of database: 843
Effective search space: 374292
Effective search space used: 374292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
