Query= MSMg01no406_c21.b1 MSMg01no406_c21.b1 CHROMAT_FILE:
MSMg01no406_c21.b1 PHD_FILE: MSMg01no406_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:24 2005
(496 letters)
>mm_chr6_111829777_111830671
Length = 895
Score = 920 bits (476), Expect = 0.0
Identities = 491/496 (98%), Gaps = 1/496 (0%)
Strand = Plus / Plus
Query: 1 caatgatggatatagacgataagcccatgtgagacatgggtgtgacatttaaagttcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgatggatatagacgataagcccatgtgagacatgggtgtgacatttaaagttcttt 260
Query: 61 gctgatggacatcattgaaggcaacattaaattctactttgcagatgcagcttacatctg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 gctgatggacatcattgaaggcaacattaaa-tctactttgcagatgcagcttacatctg 319
Query: 121 gaagggtacatttgtgtctgtgtttgtgttagtacacacaaacaagcacttgtgtgcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaagggtacatttgtgtctgtgtttgtgttagtacacacaaacaagcacttgtgtgcata 379
Query: 181 tatgtctgtgatgttttaattaggaaattgcaccgagtttcacagcccagtggatatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tatgtctgtgatgttttaattaggaaattgcaccgagtttcacagcccagtggatatgat 439
Query: 241 cagacataagccacacagctcatttattcattcacttaacaaatatgaacaaagaacctg 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cagacagaagccacacagctcatttattcattcacttaacaaatatgaacaaagaacctg 499
Query: 301 aattgccagaagaccccagtgtttctatgttgatttgtagaataaacagtgccatgtgtt 360
|||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 aattgccacaagaccctagtgtttctatgttgattcgtagaataaacagtgccatgtgtt 559
Query: 361 aacaacacaaagatgatatcagctgcaattaaacgataaaatttgttgtaaaatggagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aacaacacaaagatgatatcagctgcaattaaacgataaaatttgttgtaaaatggagcc 619
Query: 421 cactttcagggatgctgaaatgtgcttcttagaatctaaaatatgacagttttatttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cactttcagggatgctgaaatgtgcttcttagaatctaaaatatgacagttttatttctt 679
Query: 481 ttgtgccacatttaga 496
||||||||||||||||
Sbjct: 680 ttgtgccacatttaga 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 895
Length adjustment: 10
Effective length of query: 486
Effective length of database: 885
Effective search space: 430110
Effective search space used: 430110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_c21.g1 MSMg01no406_c21.g1 CHROMAT_FILE:
MSMg01no406_c21.g1 PHD_FILE: MSMg01no406_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:24 2005
(458 letters)
>mm_chr6_111992485_111993342
Length = 858
Score = 855 bits (442), Expect = 0.0
Identities = 454/458 (99%)
Strand = Plus / Minus
Query: 1 tttctttaaggagacatcaaacattattggtgactttgagtttattattaatgtgttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tttctttaaggagacatcaaacattattggtgactttgagtttattattaatgtgttcag 666
Query: 61 accaatcaaaagatacaaaatagaaatattgtgacctagaagtataatatctagtataaa 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 665 accaatcaaaagatacaaaatagaaatattgtgacctaaaagtataatatctagtataaa 606
Query: 121 aaacctagacaggttcaatattaagtcatgaataaaggtaataaacacacgacagaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aaacctagacaggttcaatattaagtcatgaataaaggtaataaacacacgacagaaaga 546
Query: 181 aaatgagcccagaataattgacaactacctccaaaataaccaagacagctgctatgactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaatgagcccagaataattgacaactacctccaaaataaccaagacagctgctatgactg 486
Query: 241 tttccagttgtctgatatgagccaggtaatagtgattgaaagggtaatgcaagcgctata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tttccagttgtctgatatgagccaggtaatagtgattgaaagggtaatgcaagcgctata 426
Query: 301 tggccaggcagcaatctgggatccaagatctatctgtctgtcttcatctttctatccttc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 425 tggccaggcagcaatctgggatccaagatctatctgtctgtcttcatctttctatctttc 366
Query: 361 gatcatctatttgtttacccctctctcaagaagtcagacggtctgtcggtctatatggat 420
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 365 gatcacctatttgtttacccctctctcaagaggtcagacggtctgtcggtctatatggat 306
Query: 421 ccttcattatgacgaagcttaatgaaaacagaattgat 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ccttcattatgacgaagcttaatgaaaacagaattgat 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
