Query= MSMg01no411_f21.b1 MSMg01no411_f21.b1 CHROMAT_FILE:
MSMg01no411_f21.b1 PHD_FILE: MSMg01no411_f21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:23 2005
(555 letters)
>mm_chr6_104514098_104515052
Length = 955
Score = 1025 bits (530), Expect = 0.0
Identities = 548/554 (98%)
Strand = Plus / Plus
Query: 2 gcggaattctctacattagatgaaaattgttataatttaaagggaaattactataatttg 61
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 202 gcggaattctcttcattagatgaaaattgttataatttaaagggaaattattataatttg 261
Query: 62 aagatgaagagtaacgatactattgtggtataatatcagtagacatcatatatcacaaac 121
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagatgaagagtaaagatactattgtggtataatatcagtagacatcatatatcacaaac 321
Query: 122 aggattaagcaaaaataatcgttttagtggctcaagcattttaaatttctatatagaaca 181
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 322 aggattaagcaaaaataatcgttttagtggctcaagcattttaaatttctatgtagaaca 381
Query: 182 agcatggttgggtatgtcatgtttctctgattttaggtattactgtagattggatggaag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agcatggttgggtatgtcatgtttctctgattttaggtattactgtagattggatggaag 441
Query: 242 ggcaaatttctataatgttggaagcatgaaaagcaagtctgtgactcacagcagcaaggg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggcaaatttctataatgttggaagcatgaaaagcaagtctgtgactcacagcagcaaggg 501
Query: 302 caagattattctcagggcaaagaaaacaggaagctaaaacaacaagaggcaacatgcata 361
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 502 caagattattctcagggcaaagaaaacaggaagctaaaacaacaggaggcaacatgcata 561
Query: 362 actaataagcagaagattctagattctgctgtcgtcatggaagtcttatatactgaagga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 actaataagcagaagattctagattctgctgtcgtcatggaagtcttatatactgaagga 621
Query: 422 gttgttgaggaaagagggagctgtttgggggagctactcacttggagaaagggttctgac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gttgttgaggaaagagggagctgtttgggggagctactcacttggagaaagggttctgac 681
Query: 482 agttaattttctatcctttataacacacttcaatattaatgagggcaatgaactttccat 541
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agttagttttctatcctttataacacacttcaatattaatgagggcaatgaactttccat 741
Query: 542 agtattagcagaaa 555
||||||||||||||
Sbjct: 742 agtattagcagaaa 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_f21.g1 MSMg01no411_f21.g1 CHROMAT_FILE:
MSMg01no411_f21.g1 PHD_FILE: MSMg01no411_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:23 2005
(518 letters)
>mm_chr6_104653074_104653991
Length = 918
Score = 965 bits (499), Expect = 0.0
Identities = 514/519 (99%), Gaps = 2/519 (0%)
Strand = Plus / Minus
Query: 1 catctgttctgattcgatggctatgcactagaatacttaggttgttatggagccgtgtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 718 catctgttctgattcgatggctatgcactagaatacttaggttgttatggtgccgtgtta 659
Query: 61 ttagtgcacatttacatggaaaatctacaaacttattttcatttctttcttgtacattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ttagtgcacatttacatggaaaatctacaaacttattttcatttctttcttgtacattca 599
Query: 121 caaaccgtcttttcagacagaaatatagaattcaaatatgtcactttttcttatgttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 caaaccgtcttttcagacagaaatatagaattcaaatatgtcactttttcttatgttcat 539
Query: 181 agaatgtttctttataaaactcactgaagtttatttcgtagacttctattgttaagagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agaatgtttctttataaaactcactgaagtttatttcgtagacttctattgttaagagat 479
Query: 241 gttttgaatatattaatgtgaacatactagatgaacaatctagcttattattatgacttc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 attttgaatatattaatgtgaacatactagatgaacaatctagcttattattatgacttc 419
Query: 301 atccttaatgcagagccattctctgcattcactgtgctatctatgtgtcaacagaaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atccttaatgcagagccattctctgcattcactgtgctatctatgtgtcaacagaaaggc 359
Query: 361 agaaaactacattatatgcaatttgctctaaaatgcaccagcttttatgacctaatgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agaaaactacattatatgcaatttgctctaaaatgcaccagcttttatgacctaatgtca 299
Query: 421 ctatgaagtctataattgcattttaaaagaggtaatattgataatatcacataggaatta 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 298 ctatgaagtctataattgcattttaagagaggtaatattgataatatcacataggaatta 239
Query: 481 gaaataatttagctcacgaaaaatc-acagactctcaca 518
|||||||||||||||||| |||||| |||||||||||||
Sbjct: 238 gaaataatttagctcacg-aaaatcaacagactctcaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
