XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACT
GACTTACTCCAAATCAGGTAGTTTAATACTTTTGAAAAGTTTCAAATACA
TAGTAAATGGCAAAGTAACCATATTTGGGGGTGAATGAGAGAACAATGCT
AGGAGCTTTCCCCATAGGCCTGAAAGCTTCTAGCATCAAAGCCACACAAA
TTCATTTCACCTCAGACTTGTCACAATCTAAATGGTAGAGTCATTACCTT
GTGAGGCTAGTAACAAGATTTACATAGTAAAACAATAACTTTTAGGTATT
TTTATAAATTTTGTTTTAAAATATGATTCGCCTGTTTGTCCCGGCTATTT
ATATTCTCGTGGGTTTTGCTACAGTTCAAGCACTGCTTTACAGTGTAAAA
AGACAACGCAGGATGCTGACACAGAGGGAGGCCTTGCTGTGGTCCTGAAT
GCTGGAGCTGTGTACAGTCTTCTTACTCATTTTTCTAGTCAGTGTCTGTC
TGTTATTGAATGTAAATGTTGCTTTTATTTCTTCAGGTGAAGGGAAGAGA
TGAGAGACACTCACAGACTGTGTGAATACTGGGCTGAGCCCAGAGTGTTC
TTTCCCTGCTTTAACTATCCCTATGCTTAGGCCTAGAAGCTTCTAGCCTC
CATACAGTTCAATTCATGCTGATGGAATAAATCTGGCTTCTCTTAGCTTC
TAACTGAATTGTCTGCCTTGCCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGT
TATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGAT
ATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGT
TGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTT
GGAGTTTCATTAGGTCCCATTTGTCAATTCTCAATCTTACAGCACAAGCC
ATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCT
TTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAA
GTTCCTTGATCCACTTAGAGGAATGGATACAGAAAATGTGGTACATCTAC
ACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCT
AGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATT
CACAAAGAAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCC
CAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACACTTGATA
CTCAAGAAGAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTTAATT
TTGGGAACAAACCCCCCTGGAAGGATTACTGAACCAAGT

Query= MSMg01no413_n11.b1 MSMg01no413_n11.b1 CHROMAT_FILE:
MSMg01no413_n11.b1 PHD_FILE: MSMg01no413_n11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:39 2005
         (545 letters)



>mm_chr6_107514168_107515113
          Length = 946

 Score = 1002 bits (518), Expect = 0.0
 Identities = 539/546 (98%), Gaps = 1/546 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatcaggtagtttaatacttttgaaaagtttcaaatacatagtaaatggcaaagtaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatcaggtagtttaatacttttgaaaagtttcaaatacatagtaaatggcaaagtaacc 260

                                                                       
Query: 61  atatttgggggtgaatgagagaacaatgctaggagctttccccataggcctgaaagcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatttgggggtgaatgagagaacaatgctaggagctttccccataggcctgaaagcttc 320

                                                                       
Query: 121 tagcatcaaagccacacaaattcatttcacctcagacttgtcacaatctaaatggtagag 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tagcatcaaagccacacaaattcatttcacctcagacttgtcacaatctaaatggtaggg 380

                                                                       
Query: 181 tcattaccttgtgaggctagtaacaagatttacatagtaaaacaataacttttaggtatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcattaccttgtgaggctagtaacaagatttacatagtaaaacaataacttttaggtatt 440

                                                                       
Query: 241 tttataaattttgttttaaaatatgattcgcctgtttgtcccggctatttatattctcgt 300
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttataaattttgtactaaaatatgattcgcctgtttgtcccggctatttatattctcgt 500

                                                                       
Query: 301 gggttttgctacagttcaagcac-tgctttacagtgtaaaaagacaacgcaggatgctga 359
           ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 501 gggttttgctacagttcaagcacgtgctttacagtgtaaaaagacaaagcaggatgctga 560

                                                                       
Query: 360 cacagagggaggccttgctgtggtcctgaatgctggagctgtgtacagtcttcttactca 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagagggaggccttgctgtggtcctgaatgctggagctgtgtacagtcttcttactca 620

                                                                       
Query: 420 tttttctagtcagtgtctgtctgttattgaatgtaaatgttgcttttatttcttcaggtg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttttctagtcagtgtctgtctgttattgaatgtaaatgttgcttttatttcttcaggtg 680

                                                                       
Query: 480 aagggaagagatgagagacactcacagactgtgtgaatactgggctgagcccagagtgtt 539
           ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 aagggaagagatgagagacacacacagactgtgtgaatactgggctgagcctagagtgtt 740

                 
Query: 540 ctttcc 545
           ||||||
Sbjct: 741 ctttcc 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 946
Length adjustment: 10
Effective length of query: 535
Effective length of database: 936
Effective search space:   500760
Effective search space used:   500760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)