TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CATATTTTTCGCAAATGCATCTGTGAATATCAGCTCCTGGGAAACATGGC
TATCATATTTCTTTGGTGTATATTCTAAATGAATGAATTCAGTTCTTATC
CCTATGCCTTCAACTCTAGTTACAGAAGGAAGCTGTTGTGTTAAACTACA
GTTAACTATGCAGTAATACTATCATGTCCATTTATACGAATTTCCCCAAA
TTTTAAATAGTATCACATATTGAAATTAAATTTTTGTGTTTCCTGTCAGT
AAAGCACTTGGTATAAAACATGAATTGTATCAAATGCTGGACATATGAAG
ACATTGATAGGACCTTTAGCTCTCTAAGCGTCTGTACAGAAAGCAACCAG
GGTCACGTAGAGTTGGAACCACTCTAGTGAACAATTGTCTTTGCTTTCCA
CCAAACGCTCTTCAAAGCAGAGGAAAGCATTTGCAGTTCTGAAGTTGTTT
TTGACAACCTGGAAAGATAACATAGTTACAGTGATTTGTTTTCAAAGTTT
TTGGGCAATAAACTACCCAATTGGACATAAAATTGATGGGTCCCCAACTT
TTAGATTAATTCAAGNTGTCTTCAGATTTTTATTTTTAGCCCAATGTGTG
TTTGAAAGCAACTCGTTAGGAAATTTTTTTAAATTCACCTGGAAAAATTT
CCTTTTTTATTAAAAAAACCGCAGGCCGGGGAT

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAATGATTACAAACTCCGGAAAAGAAAGGCC
TTTGAAGAAAACCTCAGACAGAAGAGGACTGTGATTAGCAACTGGATCAA
ATACGCACAATGGGAGGAAAGCCTGAAGGAGCTCGATAGGGCTCGATCCA
TATACGAGCGTGCTTTAGATGTGGACTACCGCAATCTTACCCTCTGGCTG
AAATATGCAGAGATGGAGATGAAGAACCGCCAGGTCAACCATGCCCGAAA
CATCTGGGACCGTGCCATCACAACTCTGCCCCGAGTCAAGCAGTTCTGGT
ACAAGTACACGTACATGGAGGAGCTGTTGGGCAACGTCGCTGGTGCTCGT
CAGGTGTTTGAGCGCTGGATGGAATGGCAGCCTGAGGAGCAGGCCTGGCA
CTCGTACATCAACTTGGAGCTGAGGTACAAAGAGGTGGAGCGGGCCCGCA
CCATTTATGAACGCTTTGTGCTCGTGCACCCTGCTGTGAAGAACTGGATC
AAGTATGCTCGGTTTGAAGAGCAGCACGCTTCTGTTGCTCATGCGCGNAA
AGTCTACGAGAGAGCCGTGGAGTTTTTCGGGGAGGAGCATATGGACCACC
ACCTCTATGTGGGCTTTGCAAGGTTGCAGAGAACCTAAAAAAATGGGAAG
GGTGCGAGTTATCTACCGATTGCCCCGGAAAGGATTCC

Query= MSMg01no415_o23.b1 MSMg01no415_o23.b1 CHROMAT_FILE:
MSMg01no415_o23.b1 PHD_FILE: MSMg01no415_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:27 2005
         (540 letters)



>mm_chr6_22955809_22956750
          Length = 942

 Score =  934 bits (483), Expect = 0.0
 Identities = 524/539 (97%), Gaps = 4/539 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccatatttttcgcaaatgcatctgtgaatatcagctcctgggaaacatggctatc 64
           ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatatttttagcaaatacatctatgaatatcagctcctgggaaacatggctatc 264

                                                                       
Query: 65  ---atatttctttggtgtatattctaaatgaatgaattcagttcttatccctatgccttc 121
              |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 attatatttctttggtgtatattctaaatgaatgaattcagttcttatccctatgtcttc 324

                                                                       
Query: 122 aactctagttacagaaggaagctgttgtgttaaactacagttaactatgcagtaatacta 181
           |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 325 aactctagttacagaaggaagctg-tgtgttaaactacagttaactatgtagtaatacta 383

                                                                       
Query: 182 tcatgtccatttatacgaatttccccaaattttaaatagtatcacatattgaaattaaat 241
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcatgtccatttatacgaattttcccaaattttaaatagtatcacatattgaaattaaat 443

                                                                       
Query: 242 ttttgtgtttcctgtcagtaaagcacttggtataaaacatgaattgtatcaaatgctgga 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttgtgtttcctgtcagtaaagcacttggtataaaacatgaattgtatcaaatgctgga 503

                                                                       
Query: 302 catatgaagacattgataggacctttagctctctaagcgtctgtacagaaagcaaccagg 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 catatgaagacattgataggacctttagctctctaagcgtctgtacagaaagcaaccagg 563

                                                                       
Query: 362 gtcacgtagagttggaaccactctagtgaacaattgtctttgctttccaccaaacgctct 421
           ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtcacatagaattggaaccgctctagtgaacaattgtctttgctttccaccaaacgctct 623

                                                                       
Query: 422 tcaaagcagaggaaagcatttgcagttctgaagttgtttttgacaacctggaaagataac 481
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 624 tcaaagcagaggaaagcatttgcagttctgaagttgtttttgacaaccaggaaagataac 683

                                                                      
Query: 482 atagttacagtgatttgttttcaaagtttttgggcaataaactacccaattggacataa 540
           ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 684 atagttacagtgatttgttttcaaagtttttggacaataaactacccaattggacataa 742


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 942
Length adjustment: 10
Effective length of query: 530
Effective length of database: 932
Effective search space:   493960
Effective search space used:   493960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)