XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGTAA
GAGACTAATTGAAATGGATTGACTCCCATATACACACACTAATTATTAAT
ACATTAGAATTGTGAAAGGCAACTTTGCCCAGGAACTGAAGATGCTTATG
GAAGTAATGGGTCACTAACCGGACATAATTGGCCTGATAACTTAATGTAT
AATTGGTTTCACTGCCTCGTCCTCACTTATATCATGAAAATCTTAACCCA
ATTATCCAAACCAGGAAGAATAAATAAATATGAAGTGTTGATATTATTTT
AGGCAGCATCCACAGTAGTAGGTTTTCACAGGACTTTTTTTGAAGGCCTT
ATTTATCCCTCCCAGTTTCTTTCTTCTCCTCGTTCTACCGTGCCTACACC
ACTCACCCTTTCACGATCCATCATTCTCTCTTGTCCCCCATGTTCTATCT
CTCCTCCCTCAAGTCCCTCCCCTCCCCCATGGCTCTTTACTAATTTCCAG
ACGTCTGTGGGAATTCAAGTTTTGGAACATATACATATATCTGCAGTCTC
AAAGCTAACACCTAAGAATAAGAGAAAGCATGTACCGCTTGTCTTTTTCA
AGGGCCCATTTTCTCACTCAGAATGATAGTTTCTAGCTCTAGCCATTTTA
CTGCACCCTTCATTTTTTATTACAGCTACATAACCATCCACTGTGGGAAT
GAACCCCTTTTTTTATCCAACTCCTTTGGGGG

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XTCGAAAATACTTCCCTTCCCTTCCCTTCCCTTCCCTTACCTTACCTTAC
CTTATCTTCCCTTACCTTAACTTCCCTTCCCTCCCCTCCCCTCCCCTGCA
CTAAAAAGAGGGGGGGGAAGAGAGAAAAAAAAAAGAGAGAAGGAGAAAAA
GGGAGAGAAAAAAAAAAAAAAGAAGAAAACAGAAAGAAAAAGAAATGTTT
TTTATNAAGAAAAAAGAAGAAAAAAAGAGAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAGAAGCAAAAATTTTTTTATTTTAGAGAAAAAAACAAAAA
AAGAAGAAACAAAAAAAAATATTTATTCAACAAACAAAAAGAAAAAAAGA
GAAAAAAATAAAAAGAAGAAAATAAGACAAACAAAAAAAAAAAAAAAAAA
ACAAAAAGAAAAAAGGGAAAAGAAGAAGAAAAAAAAAAAAAAAAGAAGAA
AAGATAAAATAAGAAAAAACAGAAAAAAGAAAAAGAATAGAAAAAGAATG
GAAAGGAAGAAAAAAAAAAAAAAAAAAAAAAGGAAAGGAAAAAAATAAAA
AAAAAAAGAAAAAAAACATAAAAAAAGGAAAAGAAAAAAGAAAAAGGAAA
AAGAAAGAAAAAAATAAGAAAAAACAACAAAAAATAAAAGCAAGAATGAA
AAAAAAATAAAAAAAAAGAAGAGAAGAAGATAGAAAACAATAATACACAA
AATGAAAGTACAAAGAAAAAAGAAAAAAAAAACAACACAAATAAAAAAAA
AGATTAAN

Query= MSMg01no416_p24.b1 MSMg01no416_p24.b1 CHROMAT_FILE:
MSMg01no416_p24.b1 PHD_FILE: MSMg01no416_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:44 2005
         (528 letters)



>mm_chr6_7955856_7956786
          Length = 931

 Score =  957 bits (495), Expect = 0.0
 Identities = 518/527 (98%), Gaps = 3/527 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtaagagactaattgaaatggattgactcccatatacacacactaattattaa 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtaagagactagttgaaatggattgactcccatatacacacactaattattaa 264

                                                                       
Query: 65  tacattagaattgtgaaaggcaactttgcccaggaactgaagatgcttatggaagtaatg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tacattagaattgtgaaaggcaactttgcccaggaactgaagatgcttatggaagtaatg 324

                                                                       
Query: 125 ggtcactaaccggacataattg---gcctgataacttaatgtataattggtttcactgcc 181
           ||||| ||||||||||||||||   |||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtcattaaccggacataattgttggcctgataacttaatgtataattggtttcactgcc 384

                                                                       
Query: 182 tcgtcctcacttatatcatgaaaatcttaacccaattatccaaaccaggaagaataaata 241
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 tcgtcctcacttatatcatgaaaatcttaacccaattgtccaaaccaggaagaataaata 444

                                                                       
Query: 242 aatatgaagtgttgatattattttaggcagcatccacagtagtaggttttcacaggactt 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatatgaagtgttgatattattttaggcagcatccacagtagtaggttttcacaggactt 504

                                                                       
Query: 302 tttttgaaggccttatttatccctcccagtttctttcttctcctcgttctaccgtgccta 361
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 505 tttttgaaggccttatttatccctcccagtttctttcttctccccgttctaccgtgccta 564

                                                                       
Query: 362 caccactcaccctttcacgatccatcattctctcttgtcccccatgttctatctctcctc 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caccactcaccctttcacgatccatcattctctcttgtcccccatgttctatctctcctc 624

                                                                       
Query: 422 cctcaagtccctcccctcccccatggctctttactaatttccagacgtctgtgggaattc 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctcaagtccctcccctcccccatggctctttactaatttccagacgtctgtgggaattc 684

                                                          
Query: 482 aagttttggaacatatacatatatctgcagtctcaaagctaacacct 528
           ||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 685 aagttttggaacacatacacatatctgcagtctcaaagctaacacct 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 931
Length adjustment: 10
Effective length of query: 518
Effective length of database: 921
Effective search space:   477078
Effective search space used:   477078
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)