MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-417O13
Chromosome	6 (Build37)
Map Location	37,545,970 - 37,546,486
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039370, Ptn, LOC100039514, Dgki, EG665024, Creb3l2, Akr1d1, LOC665046
Downstream gene	Ybx1-ps2, LOC100039636, LOC665102, Trim24, Svopl, Atp6v0a4, LOC100039657, D630002J15Rik, D630045J12Rik, LOC665125, Zc3hav1l, Zc3hav1, Rpl30-ps1, Ttc26, D130059P03Rik, 3110054G05Rik, 1110001J03Rik, LOC621228, Luc7l2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039370 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039370
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ptn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19242 MGI:97804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039514 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Dgki (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320127 MGI:2443430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665024 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665024 MGI:3645151
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs

name	Creb3l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208647 MGI:2442695
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208665 MGI:2384785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665046 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665046
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Ybx1-ps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94283 MGI:2137671
definition	gene_synonym : Msy-3 note : Y box protein 1, pseudogene 2 pseudo : _no_value

name	LOC100039636 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 666 ESTs, 13 Proteins

name	LOC665102 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665102
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Trim24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21848 MGI:109275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Svopl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320590 MGI:2444335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v0a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140494 MGI:2153480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039657 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039657
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	D630002J15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77522 MGI:1924772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 12 ESTs, 1 Protein

name	D630045J12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330286 MGI:2669829
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 104 ESTs, 1 Protein

name	LOC665125 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins pseudo : _no_value

name	Zc3hav1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209032 MGI:2443387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zc3hav1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78781 MGI:1926031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl30-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19947 MGI:1321399
definition	gene_synonym : RpL30-2 note : ribosomal protein L30, pseudogene 1 pseudo : _no_value

name	Ttc26 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:264134 MGI:2444853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D130059P03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320538 MGI:2444236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110054G05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73239 MGI:1920489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs

name	1110001J03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66117 MGI:1913367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC621228 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Luc7l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192196 MGI:2183260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130571 GeneID:19242 MGI:97804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleiotrophin transcript_id : NM_008973.2

name	LOC100039514 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255051 GeneID:100039514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to gag protein transcript_id : XM_001473142.1

name	Dgki (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487070 GeneID:320127 MGI:2443430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol kinase, iota transcript_id : NM_001081206.1

name	EG665024 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377267 GeneID:665024 MGI:3645151
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs product : predicted gene, EG665024 transcript_id : XM_975724.1

name	Creb3l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803456 GeneID:208647 MGI:2442695
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cAMP responsive element binding protein 3-like 2 transcript_id : NM_178661.3

name	Akr1d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703733 GeneID:208665 MGI:2384785
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member D1 transcript_id : NM_145364.1

name	LOC100039636 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255053 GeneID:100039636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 666 ESTs, 13 Proteins product : similar to vacuolar H(+)-ATPase transcript_id : XM_001473491.1

name	Trim24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94420997 GeneID:21848 MGI:109275
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif protein 24 transcript_id : NM_145076.3

name	Svopl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387964 GeneID:320590 MGI:2444335
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SV2 related protein homolog (rat)-like transcript_id : NM_177200.3

name	Atp6v0a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24371245 GeneID:140494 MGI:2153480
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V0 subunit A4 transcript_id : NM_080467.2

name	LOC100039657 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255055 GeneID:100039657
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100039657 transcript_id : XM_001473543.1

name	D630002J15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377270 GeneID:77522 MGI:1924772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 12 ESTs, 1 Protein product : RIKEN cDNA D630002J15 gene transcript_id : XM_885435.2

name	D630045J12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377271 GeneID:330286 MGI:2669829
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 104 ESTs, 1 Protein product : RIKEN cDNA D630045J12 gene transcript_id : XM_974678.1

name	Zc3hav1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803007 GeneID:209032 MGI:2443387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger CCCH-type, antiviral 1-like transcript_id : NM_172467.2

name	Zc3hav1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383007 GeneID:78781 MGI:1926031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger CCCH type, antiviral 1 transcript_id : NM_028864.2

name	Ttc26 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734470 GeneID:264134 MGI:2444853
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 26 transcript_id : NM_153600.2

name	D130059P03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560745 GeneID:320538 MGI:2444236
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D130059P03 gene transcript_id : NM_177185.3

name	3110054G05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255049 GeneID:73239 MGI:1920489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs product : RIKEN cDNA 3110054G05 gene transcript_id : XM_001472971.1

name	1110001J03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801827 GeneID:66117 MGI:1913367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110001J03 gene transcript_id : NM_025363.3

name	Luc7l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20373166 GeneID:192196 MGI:2183260
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LUC7-like 2 (S. cerevisiae) transcript_id : NM_138680.1

name	Ptn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679543 CCDS:CCDS20005.1 GeneID:19242 MGI:97804
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence TAS] GO_process : GO:0030282 - bone mineralization [Evidence IDA]; GO:0007612 - learning [Evidence IMP]; GO:0001503 - ossification [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : osteoblastic cell factor; heparin-binding brain mitogen; heparin-binding growth factor 8; heparin affin regulatory peptide; heparin-binding neurotorphic factor; heparin-binding neurite promoting factor; heparin-binding growth-associated molecule product : pleiotrophin protein_id : NP_032999.1

name	LOC100039514 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255052 GeneID:100039514
definition	codon_start : 1 product : similar to gag protein protein_id : XP_001473192.1

name	Dgki (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487071 GeneID:320127 MGI:2443430
definition	GO_function : GO:0004143 - diacylglycerol kinase activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007205 - protein kinase C activation [Evidence IEA] codon_start : 1 product : diacylglycerol kinase, iota protein_id : NP_001074675.1

name	EG665024 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377268 GeneID:665024 MGI:3645151
definition	codon_start : 1 product : similar to zinc finger protein 59 protein_id : XP_980818.1

name	Creb3l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520035 CCDS:CCDS20006.1 GeneID:208647 MGI:2442695
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cAMP responsive element binding protein 3-like 2 protein_id : NP_848776.1

name	Akr1d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703734 CCDS:CCDS20007.1 GeneID:208665 MGI:2384785
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0047568 - 3-oxo-5-beta-steroid 4-dehydrogenase activity [Evidence IEA] [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006699 - bile acid biosynthesis [Evidence ISS]; GO:0030573 - bile acid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 product : aldo-keto reductase family 1, member D1 protein_id : NP_663339.1

name	LOC100039636 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255054 GeneID:100039636
definition	codon_start : 1 product : similar to vacuolar H(+)-ATPase protein_id : XP_001473541.1

name	Trim24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94420998 CCDS:CCDS20008.1 GeneID:21848 MGI:109275
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0016922 - ligand-dependent nuclear receptor binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003713 - transcription coactivator activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 note : transcriptional intermediary factor 1, alpha product : tripartite motif protein 24 protein_id : NP_659542.3

name	Svopl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893221 CCDS:CCDS20009.1 GeneID:320590 MGI:2444335
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SV2 related protein homolog (rat)-like protein_id : NP_796174.1

name	Atp6v0a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24371246 CCDS:CCDS20010.1 GeneID:140494 MGI:2153480
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0005903 - brush border [Evidence IDA]; GO:0016471 - hydrogen-translocating V-type ATPase complex [Evidence IPI] [Evidence ISS] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism [Evidence ISS] [Evidence IPI] GO_process : GO:0015991 - ATP hydrolysis coupled proton transport [Evidence IPI] [Evidence ISS]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ATPase, H+ transporting, lysosomal (vacuolar proton pump) noncatalytic accessory protein 1B; V-ATPase alpha 4; vacuolar proton translocating ATPase 100 kDa a4 subunit product : ATPase, H+ transporting, lysosomal V0 subunit A isoform 4 protein_id : NP_536715.2

name	LOC100039657 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255056 GeneID:100039657
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473593.1

name	D630002J15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82900837 GeneID:77522 MGI:1924772
definition	codon_start : 1 product : hypothetical protein LOC77522 protein_id : XP_890528.1

name	D630045J12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377272 GeneID:330286 MGI:2669829
definition	codon_start : 1 product : hypothetical protein LOC330286 protein_id : XP_979772.1

name	Zc3hav1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369640 CCDS:CCDS20011.1 GeneID:209032 MGI:2443387
definition	codon_start : 1 product : zinc finger CCCH-type, antiviral 1-like protein_id : NP_766055.1

name	Zc3hav1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21746169 CCDS:CCDS20012.1 GeneID:78781 MGI:1926031
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003950 - NAD+ ADP-ribosyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009615 - response to virus [Evidence ISS]; GO:0019081 - viral protein biosynthesis [Evidence ISS] codon_start : 1 product : zinc finger CCCH type, antiviral 1 protein_id : NP_083140.1

name	Ttc26 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734471 GeneID:264134 MGI:2444853
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 26 protein_id : NP_705828.2

name	D130059P03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560746 GeneID:320538 MGI:2444236
definition	GO_component : GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC320538 protein_id : NP_796159.2

name	3110054G05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255050 GeneID:73239 MGI:1920489
definition	codon_start : 1 product : hypothetical protein LOC73239 protein_id : XP_001473021.1

name	1110001J03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384728 CCDS:CCDS20014.1 GeneID:66117 MGI:1913367
definition	codon_start : 1 product : hypothetical protein LOC66117 protein_id : NP_079639.1

name	Luc7l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20373167 CCDS:CCDS20015.1 GeneID:192196 MGI:2183260
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation function : probably involved in pre-mRNA-splicing note : CGI-74-like SR-rich product : LUC7-like 2 protein_id : NP_619621.1

name	LOC100039370 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039370
definition	number : 1 pseudo : _no_value

name	LOC665046 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665046
definition	number : 1 pseudo : _no_value

name	LOC665102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665102
definition	number : 2 pseudo : _no_value

name	LOC665102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665102
definition	number : 1 pseudo : _no_value

name	LOC621228 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621228
definition	number : 4 pseudo : _no_value

name	LOC621228 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621228
definition	number : 3 pseudo : _no_value

name	LOC621228 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621228
definition	number : 2 pseudo : _no_value

name	LOC621228 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621228
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:225111
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:144299
definition	standard_name : Ptn

name	(CDS detail)
type	STS
link
xref	UniSTS:144298
definition	standard_name : Ptn

name	(CDS detail)
type	STS
link
xref	UniSTS:162976
definition	standard_name : RH126268

name	(CDS detail)
type	STS
link
xref	UniSTS:214967
definition	standard_name : RH131684

name	(CDS detail)
type	STS
link
xref	UniSTS:235412
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:142580
definition	standard_name : D6Jpk1

name	(CDS detail)
type	STS
link
xref	UniSTS:216279
definition	standard_name : RH132996

name	(CDS detail)
type	STS
link
xref	UniSTS:235413
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:491879
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:167470
definition	standard_name : D6Ertd160e

name	(CDS detail)
type	STS
link
xref	UniSTS:123056
definition	standard_name : 10.MMHAP8FRD7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130848
definition	standard_name : D6Mit298

name	(CDS detail)
type	STS
link
xref	UniSTS:124671
definition	standard_name : 47.MMHAP91FLH5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:125502
definition	standard_name : N28141

name	(CDS detail)
type	STS
link
xref	UniSTS:161882
definition	standard_name : RH125060

name	(CDS detail)
type	STS
link
xref	UniSTS:142576
definition	standard_name : D6Bwg1452e

name	(CDS detail)
type	STS
link
xref	UniSTS:445466
definition	standard_name : stSG602774

name	(CDS detail)
type	STS
link
xref	UniSTS:141463
definition	standard_name : D0Nds34

name	(CDS detail)
type	STS
link
xref	UniSTS:235415
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235416
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130699
definition	standard_name : D6Mit154

name	(CDS detail)
type	STS
link
xref	UniSTS:166621
definition	standard_name : Kifl1-ps

name	(CDS detail)
type	STS
link
xref	UniSTS:161309
definition	standard_name : RH124487

name	(CDS detail)
type	STS
link
xref	UniSTS:235417
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:209701
definition	standard_name : RH126578

name	LOC665125 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255047 GeneID:665125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins product : similar to Rps16 protein pseudo : _no_value transcript_id : XR_030916.1

clone name	MSMg01-318J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390N16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-370F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345H06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-335F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234F09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-445L02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-493N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546C10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-133E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233E23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-417O13.T7 (MSMg01no417_o13.b1)	MSMg01-417O13.TJ (MSMg01no417_o13.g1)
ACC	AG513375	AG513376
length	745	761
length of high quality (start - end)	345 (330 - 674)	517 (76 - 592)
definition	CHROMAT_FILE: MSMg01no417_o13.b1 PHD_FILE: MSMg01no417_o13.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:36:57 2005	CHROMAT_FILE: MSMg01no417_o13.g1 PHD_FILE: MSMg01no417_o13.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:36:57 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG CGGAATTCTACCATTTTCCAGGTTACAGAGTGTTTTTGAAAAAAAATAAA TAGAGGAGATTATCTATTCACTATTTAGGTTATAAAGTAAGTCAACAACA ACAAAAATCTACCACAAAAGATACAGAGCAGAAGAGATCAATTGCAAACT CTTAATGATTTTCAAAAATTAATGGGAGATATTAATTAGTTAGAGCCTAT CATTGGATTAGCTACTCAAGAATGAGATAATTTGTTTCAAAGATTACAAA GAGATTGATACTTAAACAGTCGTGTTCTGGTGAGATGGCTTCCGAAGGTC CTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCGTAATGA GATCTGATGCCCTCTTCTGGTACACCTGAAGACAGATACAATGTACTTAC ATATAATAAATAAATAAATCTTAAAAAAAAAAAAAGACTTAAACAGTCTA AGATGGTTAACAGCTGAAGCAGAGAGTTAACTCTGGGAGACCAGAGACTG CACGATGCATATGTAGATTGCCTAGATGCCAAACTTGACTGTATTTTTGT TATTTTGCCTTCAACTCATTCTCCTACTGGGCTCATTATACAAAGAGAAG AGAGTATTATGGAATGGATTTTCTCAGCACACAAACAAAGTCAAACAAAA ATGAAGACTTAGATAAGAAAATGTTCTATTTAATCATAAAAGATA	NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXATTGTCATGCAATAAATTCTGACAC CACTGGAAGAGCCAAATGTGTTCATCTGTGTTTCTGACACAGCACACACA TGACAGGCAGAAAGATGTGATACCTTTTCCTGCCATCATAAGGGCCACAG CAAACACTTATAAAAAAACAAAAAACAAAACAAAACAAAACAAAAAGACA AATTAACAGGAGAAAAATATAATGGATTTATTTCATCAAAGTAGCACATG AGATTTCAGAGACAAAGTGACCCATGGGGAAATGATCAGTGTATGCTTAC ATTTGATAAGGATGAATACATGAATAGAACTGGATTGGATGGAGAAGATG CAACCTTGTGGTCCCAGACTAAGAACGTAAACAAAACAAGACCTGTCTAA ATTCTTCAGGCTTCTCTGTCCAGCTTTCCCTTCTCTGAGGTACAGGACAG AATCCTTCCTCGAGGCCTTTTGTCCTATGTCCTACAACATAAGTCAGACA GNACTTTTTTATTTTTATTTTTTTAAATGGCTGTCTCTTATACAAGGAGG TGGGGAAGAATAGAGCAGTGGTCTTCACCCTGTGGGGTCACGACCTCTTT GAGGGTCACATATCAGATATCCTGCNTATCAGATATGTACAGAGCTAACA TGAGGAACTGTATTAAAAGTCCGCCGCATTAAGAAAAGGTGAAGGCCACT GGGCTAAAAAA
quality values	Open. Hide. 6 6 6 6 9 11 11 10 10 16 13 22 19 8 3 0 3 9 11 22 19 19 13 13 12 19 28 34 27 15 20 15 13 7 8 6 8 8 8 8 9 11 11 12 12 23 23 27 30 32 34 41 29 23 19 23 28 30 32 28 17 10 8 8 9 10 13 12 9 11 11 12 12 15 30 28 32 34 34 44 53 53 53 57 59 59 59 59 59 59 59 57 57 47 48 48 42 42 37 39 39 43 44 57 57 59 50 54 54 48 47 47 54 54 57 57 46 46 43 46 46 57 59 59 59 59 54 59 59 57 57 57 57 57 57 68 68 57 57 57 59 59 59 59 68 68 68 59 59 59 59 57 57 57 50 42 37 41 50 50 57 57 57 57 57 57 68 68 68 57 57 57 57 52 54 54 57 57 57 54 54 54 57 57 50 50 50 50 50 50 57 57 57 57 59 57 57 57 57 57 57 59 57 57 57 57 57 57 57 68 57 68 68 68 57 57 57 57 68 68 68 68 68 68 68 59 57 57 57 57 57 68 68 57 57 57 57 54 57 57 68 68 68 59 59 59 59 59 59 59 59 59 57 57 47 47 47 44 44 44 59 59 68 68 68 68 68 68 57 57 57 68 57 57 57 57 57 59 59 68 68 59 59 68 59 59 59 59 57 59 59 59 59 68 57 57 57 57 57 57 59 57 57 57 57 57 57 59 59 59 59 59 59 59 50 50 50 30 30 11 10 12 10 8 8 9 11 11 18 12 19 31 34 50 50 50 50 48 48 57 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 68 68 68 59 59 57 57 57 57 54 54 54 54 57 57 57 57 54 54 46 48 59 59 68 59 59 54 59 57 59 59 57 54 54 54 47 57 57 57 68 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 54 54 54 57 57 68 68 68 68 68 57 57 52 52 57 57 57 59 57 57 54 54 52 52 57 57 57 57 57 57 52 52 43 43 35 35 43 43 52 52 57 57 59 59 59 59 57 57 57 57 57 57 43 43 44 43 43 43 31 31 43 44 36 43 43 57 57 46 46 43 46 44 48 48 48 54 54 59 48 48 43 43 43 37 37 42 37 32 32 35 39 44 48 48 48 47 42 35 37 42 39 36 37 37 30 32 36 34 34 39 34 30 30 31 33 47 43 43 43 43 43 43 43 36 34 33 33 33 28 37 37 39 37 30 24 13 13 28 28 37 37 32 31 24 30 31 32 36 36 41 30 31 23 23 28 34 34 48 37 37 37 37 37 37 37 43 43 37 37 37 37 20 19 15 11 11 19 31 37 37 37 37 40 40 33 33 30 25 30 30 31 22 25 25 22 30 34 47 37 33 30 23 23 23 28 28 25 25 21 29 16 18 17 20 18 28 15 20 22 24 28 32 34 32 25 24 28 24 24 30 37 27 16 10 12 12 13 10 20 23 20 20 23 16 15 15 15 13 13 13 15 12 13 13 14 21 24 22 23 23 28 22 24 28 24 30 18 19 13 21 18 18 12 7 7 10 8 8 8 8 12 10 11 13 14 13 14 19 21 28 21 21 19 19 12 13 14 19 21 25 22 19 21 11 11 15 12	Open. Hide. 0 3 7 6 6 10 12 10 9 8 8 8 8 8 8 10 10 27 25 37 35 31 37 29 32 29 29 37 25 16 23 9 6 6 6 6 7 6 10 10 13 16 17 24 23 18 30 35 35 37 32 36 37 37 33 33 25 23 12 9 9 9 9 9 12 9 15 15 15 10 13 21 21 24 28 33 36 36 36 36 36 36 37 50 57 57 57 57 57 57 53 53 53 53 68 47 47 36 42 41 41 41 41 47 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 68 68 68 68 68 68 68 68 68 68 68 50 68 51 50 51 50 68 68 68 68 68 68 68 48 48 46 46 41 48 57 68 57 68 68 68 68 68 68 68 68 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 62 62 43 29 24 18 14 14 13 12 12 12 21 32 43 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 54 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 59 59 59 59 59 59 59 57 57 57 59 59 59 59 59 57 57 68 68 57 57 57 57 57 57 54 54 54 59 57 68 57 57 57 57 57 59 59 57 59 57 59 59 59 59 59 59 59 48 48 48 57 48 54 54 57 57 48 54 54 57 57 54 54 54 59 59 47 30 30 28 37 37 48 48 48 48 48 48 48 47 47 43 43 48 48 48 48 48 39 39 36 39 28 34 25 24 24 39 43 59 59 31 35 35 47 47 47 47 39 39 36 37 37 37 30 25 27 32 43 47 47 47 47 46 46 28 28 13 16 16 3 0 3 23 23 47 59 47 39 39 35 35 35 39 39 43 37 36 36 59 59 37 37 37 29 29 26 24 19 15 15 15 16 18 20 32 28 27 27 25 22 20 18 16 20 20 24 26 19 13 13 13 27 27 23 18 11 11 11 11 12 9 9 9 15 15 12 10 11 14 11 11 11 14 13 17 17 15 25 23 23 11 11 11 21 23 15 15 11 19 18 22 11 11 11 17 13 14 14 15 13 12 10 10 9 9 11 17 18 22 12 13 12 22 11 11 9 9 9 20 13 17 17 11 3 0 3 18 18 16 11 11 9 9 9 16 12 12 12 12 12 11 11 10 10 15 14 13 10 10 10 19 15 15 14 14 14 15 13 12 12 12 21 11 10 8 9 8 8 8 6 7 6 6 6 8 10 10 11 11 11 11 17 12 20 20 11 8 8 8 8 8 9 11 11 10 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no417_o13.g1 MSMg01no417_o13.g1 CHROMAT_FILE:
MSMg01no417_o13.g1 PHD_FILE: MSMg01no417_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:57 2005
         (517 letters)



>mm_chr6_37545770_37546686
          Length = 917

 Score =  994 bits (514), Expect = 0.0
 Identities = 516/517 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgtcatgcaataaattctgacaccactggaagagccaaatgtgttcatctgtgtttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgtcatgcaataaattctgacaccactggaagagccaaatgtgttcatctgtgtttct 260

                                                                       
Query: 61  gacacagcacacacatgacaggcagaaagatgtgataccttttcctgccatcataagggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacacagcacacacatgacaggcagaaagatgtgataccttttcctgccatcataagggc 320

                                                                       
Query: 121 cacagcaaacacttataaaaaaacaaaaaacaaaacaaaacaaaacaaaaagacaaatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagcaaacacttataaaaaaacaaaaaacaaaacaaaacaaaacaaaaagacaaatta 380

                                                                       
Query: 181 acaggagaaaaatataatggatttatttcatcaaagtagcacatgagatttcagagacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaggagaaaaatataatggatttatttcatcaaagtagcacatgagatttcagagacaa 440

                                                                       
Query: 241 agtgacccatggggaaatgatcagtgtatgcttacatttgataaggatgaatacatgaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgacccatggggaaatgatcagtgtatgcttacatttgataaggatgaatacatgaat 500

                                                                       
Query: 301 agaactggattggatggagaagatgcaaccttgtggtcccagactaagaacgtaaacaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaactggattggatggagaagatgcaaccttgtggtcccagactaagaacgtaaacaaa 560

                                                                       
Query: 361 acaagacctgtctaaattcttcaggcttctctgtccagctttcccttctctgaggtacag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaagacctgtctaaattcttcaggcttctctgtccagctttcccttctctgaggtacag 620

                                                                       
Query: 421 gacagaatccttcctcgaggccttttgtcctatgtcctacaacataagtcagacagnact 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 gacagaatccttcctcgaggccttttgtcctatgtcctacaacataagtcagacagtact 680

                                                
Query: 481 tttttatttttatttttttaaatggctgtctcttata 517
           |||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttttatttttatttttttaaatggctgtctcttata 717


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space:   459849
Effective search space used:   459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information