Query= MSMg01no418_a04.b1 MSMg01no418_a04.b1 CHROMAT_FILE:
MSMg01no418_a04.b1 PHD_FILE: MSMg01no418_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:05 2005
(377 letters)
>mm_chr6_135290889_135291665
Length = 777
Score = 690 bits (357), Expect = 0.0
Identities = 369/373 (98%)
Strand = Plus / Minus
Query: 5 gaattcttacctttccgagaccagagatttagctccctctacaaccacccaaatctgtgg 64
||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gaattcttaccatactgagaccagagatttagctccctctacaaccacccaaatctgtgg 518
Query: 65 ctagacaataagtcatctcatctttccttctggctgcggtggttactatttttaactgtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctagacaataagtcatctcatctttccttctggctgcggtggttactatttttaactgtc 458
Query: 125 ttgaatgtccaggaaggacctgtggggaaggtagccagggcagcagagacccatttcctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttgaatgtccaggaaggacctgtggggaaggtagccagggcagcagagacccatttcctg 398
Query: 185 gctcaggagcccacagccctgggatggtttcctgtttgccgtagcagagctgtgtttgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gctcaggagcccacagccctgggatggtttcctgtttgccgtagcagagctgtgtttgta 338
Query: 245 catggggggagtctgtcattcctttacagtctataggtttcgcaacactactaggaaagg 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 337 catggggggagtctgtcattcctttacagtctaaaggtttcgcaacactactaggaaagg 278
Query: 305 aaaagaagaaatcaactctgcccgactcagccctccaagcaattatctttctgctgggtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaaagaagaaatcaactctgcccgactcagccctccaagcaattatctttctgctgggtt 218
Query: 365 gggaggagaatgc 377
|||||||||||||
Sbjct: 217 gggaggagaatgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_a04.g1 MSMg01no418_a04.g1 CHROMAT_FILE:
MSMg01no418_a04.g1 PHD_FILE: MSMg01no418_a04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:05 2005
(217 letters)
>mm_chr6_135114013_135114628
Length = 616
Score = 412 bits (213), Expect = e-120
Identities = 216/217 (99%), Gaps = 1/217 (0%)
Strand = Plus / Plus
Query: 1 accccctgcagagggaggcctatctaaaacaaatttcctgggatagcttgctaggaggga 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accccct-cagagggaggcctatctaaaacaaatttcctgggatagcttgctaggaggga 259
Query: 61 tttgtgttagtgaaacacttcttgtaactataatgacataataatatgcataagccttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tttgtgttagtgaaacacttcttgtaactataatgacataataatatgcataagccttat 319
Query: 121 ccctagccataagtctgaatcaggactgtatctagaaccacaacttgcatgttgttgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccctagccataagtctgaatcaggactgtatctagaaccacaacttgcatgttgttgatg 379
Query: 181 ctctataaacactttccttccccccctccctccctcc 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctctataaacactttccttccccccctccctccctcc 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 616
Length adjustment: 9
Effective length of query: 208
Effective length of database: 607
Effective search space: 126256
Effective search space used: 126256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
