Query= MSMg01no422_c13.b1 MSMg01no422_c13.b1 CHROMAT_FILE:
MSMg01no422_c13.b1 PHD_FILE: MSMg01no422_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:33 2005
(565 letters)
>mm_chr6_137366473_137367437
Length = 965
Score = 1085 bits (561), Expect = 0.0
Identities = 564/565 (99%)
Strand = Plus / Minus
Query: 1 atttcttaaacatctcttccttctaggaacttcctttccaattgtaaatgacaaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 atttcttaaacatctcttccttctaggaacttcctttccaattgtaaatgacaaaggcat 706
Query: 61 cataaaaattccataattgcctctgtctttgatacaagaggcaagaccttgggctgcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 cataaaaattccataattgcctctgtctttgatacaagaggcaagaccttgggctgcaca 646
Query: 121 cttttatttaatatttgaatggatgtgttggctcccgtgggcctatggctgccacttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cttttatttaatatttgaatggatgtgttggctcccgtgggcctatggctgccacttgtt 586
Query: 181 tatggtggctgtttttctggagcccgaagcacagctttggaccctctgctggatgacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tatggtggctgtttttctggagcccgaagcacagctttggaccctctgctggatgacttc 526
Query: 241 attttctctttttcctctacttaagaatcccattcagtttatagcaatgattgtggccca 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 attttccctttttcctctacttaagaatcccattcagtttatagcaatgattgtggccca 466
Query: 301 tggtgatctagtcattaattaaccactgaaataaaggacgaccagaagaaaaatcaccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tggtgatctagtcattaattaaccactgaaataaaggacgaccagaagaaaaatcaccta 406
Query: 361 tgccttacaataaaatcgaatttgaagcaagtactggccagctcgagcgtctggggccgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tgccttacaataaaatcgaatttgaagcaagtactggccagctcgagcgtctggggccgc 346
Query: 421 gacttggtatcatactcaccaactgtaggggagtttcccttccctttctaaggatgcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gacttggtatcatactcaccaactgtaggggagtttcccttccctttctaaggatgcaaa 286
Query: 481 gttaacaaacgtgccagctccacattccctgtttgaaagagacaaactcaaggtgattac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gttaacaaacgtgccagctccacattccctgtttgaaagagacaaactcaaggtgattac 226
Query: 541 ttgacagagctctttgcctgacacg 565
|||||||||||||||||||||||||
Sbjct: 225 ttgacagagctctttgcctgacacg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_c13.g1 MSMg01no422_c13.g1 CHROMAT_FILE:
MSMg01no422_c13.g1 PHD_FILE: MSMg01no422_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:33 2005
(579 letters)
>mm_chr6_137220716_137221694
Length = 979
Score = 1036 bits (536), Expect = 0.0
Identities = 566/582 (97%), Gaps = 10/582 (1%)
Strand = Plus / Plus
Query: 1 aaatcagngaaagggataatattgtctccttcccagtacctccattgctggttaaaagaa 60
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 aaatcagtgaaagggataatattgtctccttcccagtaccaccattgctggttaaaagaa 260
Query: 61 gcgaaggcaggtatggtgtgcattattgaaactgttccatgttgacaattcggatctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgaaggcaggtatggtgtgcattattgaaactgttccatgttgacaattcggatctttc 320
Query: 121 cgatcatgtaagatcagcgtggtgagtactttgtgaagttttcagacaactccccttttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgatcatgtaagatcagcgtggtgagtactttgtgaagttttcagacaactcccc----- 375
Query: 181 a-----acaggctttccgtacatttgcgattccgtggctcttttcatatgctgatctcca 235
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agaagaacaggctttccgtacatttgcgattccgtggctcttttcatatgctgatctcca 435
Query: 236 ttcagtttcttgnctttcttttttcacaaaccatctgggagattgacacattgcctctca 295
||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttcagcatctagtctttcttttttcacaaaccatctgggagattgacacattgcctctca 495
Query: 296 ccagatggcctaacatgccgatctctcacttccgtggcaccatacttccatgataaacca 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ccagatggcctaacatgccgatctctcacttccgtggcaccatacttccatgataaacca 555
Query: 356 ccctgaatactttaacacagtgctgttgcccaaaaattcctctgcttacagtgctgagaa 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccctgaatactttaacacagtgctgttgcccaaaaattcctctgcttacagtgctgagaa 615
Query: 416 ccaccccattgttggccatttcatttcccagggtccaaactccgtatgattttcatcatt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ccaccccattgttggccatttcatttcccagggtccaaactccgtatgattttcatcatt 675
Query: 476 gtacaaaactgttctagggatccaaggagctgaacagttcagctgagaaccatcctgtct 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gtacaaaactgttctagggatccaaggagctgaacagttcagctgagaaccatcctgtct 735
Query: 536 tcattccacctgtcttcttaccccatctttccctctctcttc 577
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tcattccacctgtcttcttaccccatctttccctctctcttc 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
