Query= MSMg01no424_a10.b1 MSMg01no424_a10.b1 CHROMAT_FILE:
MSMg01no424_a10.b1 PHD_FILE: MSMg01no424_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:52 2005
(244 letters)
>mm_chr6_112668399_112669042
Length = 644
Score = 426 bits (220), Expect = e-124
Identities = 238/244 (97%)
Strand = Plus / Plus
Query: 1 agagaccccagagaaccacagggaagtggacacgggctgtcagccttagctctgcacagc 60
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 201 agagaccccagagaaccacagggaagtgaacacgaactgtcagccttagctctgcacagc 260
Query: 61 agaaaatcagctaagcaatgccttggttcacccctttctgccttttcctcccctgtcacg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaatcagctaagcaatgccttggttcacccctttctgccttttcctcccctgtcaca 320
Query: 121 ccttttcctcccagtacgacaggacccactaccgcagctagaaatgacaccccactccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttttcctcccagtacgacaggacccactaccgcagctagaaatgacaccccactccac 380
Query: 181 ccctttctgggtttttcggacgaatgaggcatttgctctagcgtggaaccatctggaaga 240
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ccctttctgggtttttcggaagaatgaggcatttgctctagtgtggaaccatctggaaga 440
Query: 241 ggag 244
||||
Sbjct: 441 ggag 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no424_a10.g1 MSMg01no424_a10.g1 CHROMAT_FILE:
MSMg01no424_a10.g1 PHD_FILE: MSMg01no424_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:52 2005
(181 letters)
>mm_chr6_112866222_112866801
Length = 580
Score = 290 bits (150), Expect = 3e-83
Identities = 172/180 (95%), Gaps = 3/180 (1%)
Strand = Plus / Minus
Query: 3 ccttttgcattcattagcatgtataactgtccttcctt-aatatatgaggtattacccct 61
|||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 380 ccttttgcattcat--gcatgtataactgtccttccttaaacatatgaggtattacccct 323
Query: 62 cagtgctcttcaaggttagctgccctttgaagatctcctatgtcagtcacctttccatgt 121
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 322 cagtgctcttcaaggttagctgccctttgaagatctcctatatcagtcacctttccatgt 263
Query: 122 gacaagacagtcaatttaaagataggaaaggtgaagaaagctgctaacccagggttggcc 181
||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||
Sbjct: 262 gacaagacagtcaatttaaagatagaaaaagtgaagaaagctgcaaacccagggttggcc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 580
Length adjustment: 8
Effective length of query: 173
Effective length of database: 572
Effective search space: 98956
Effective search space used: 98956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
