TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTGGTTTATAGGAAGGCTTCCAGTCATATTTATAGAATTGAATG
AGTCACTGGGAGTGTCTAAGAGTAGAGGAATCCATTCAAACTTAGGATCT
TCTTGATTTATTGGAATAAGGGATGTGTTAGAATGAAGGTCTACATCTGG
AGTAATTTTCCAGCTGTGGACGCAAATGTAGTTGGTTTTTTGTTTTTGTT
TTCCCAATCAATAAACTTCCTTGTGAATCTCTTCTTATCCGCCCCTGCTC
TTTTTTATTTCATTAGAGGGCGTTTTAACACTGAGGGCAAAACCGCCACC
TCCTGATGAATTTGTTGACTGTTTCCAGAAGTTTAAACATGGATTCAACC
TTCTGGTAGGTGCACTTTATTGATAGATACTAGAAGAAACAGATGGAAAA
AAAATCAAAGTTTAGCCAAGTGTTCCTAAAAAATTAAATTAAGAGATAGA
GTTGTCCCTGTGGATTTGTGGGCGTGTGTTTTGATTGGCCTTTCATGATA
ACCTCAGATTGAAAGGCGTGCATGACAAAGAGTTGTATTTCTTGGCTGGC
TCTTCCCCGCATTCGCTCCATGCTGAAGGAAGCTCTCTCTAAAGAGAAAT
GTTTAGGAAAGACGTCTCCTTTCAAGTCTTGCAATGGAATGGTCCTTTGA
AATCCCACCCTTGGGGGGGAATGGGGTGTGGAGGCCTACCCTGTC

GCTACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTGTAGGATTCCCACTCATTTCA
GCACTAAATAACTAATCCACCTTGCGTCAACACTGACTACTTTGTGTACA
CTTTTCATATTCTGTTCTGGCAAGGACACCTTGGTGACCACTCTTTCCAA
CCTGGATGTTGTCCTAACTCTAAGACGAGAAAGTAAAGACCAATGAGACA
GGGAATCTGTCCTCAGAAATGGTGTCACCTTACACAAAAGGCAACACAGA
AGGCAGAATGAGGTCCATGTCACATGACAACCTCTGCACAAGGGACGCAG
AGGTGGATTTTTTTTTCCTCAAAGGTCACAGAGAAGGCTCTCTGAGGAGC
TGCTTCAGGCAGAGAATGTGCAGGCTGCCTTCACGACTTGCTATCTCCAG
AGAAAATGTATTTCTATGACCCATAGTTCCTGTGTATTCATACCTCTCAT
TTCAGAGATGGTAAATGAATTCATACTTCCATGACTAGAATCTGCATCTG
TAAGAGCCATTTGATAGTAAGCCGTGCCGGTTCAGCCTTAGCACATACAG
TGCGTGTTCTGATAGCCATAAACTTTTTTTTTAAGTCTTTAGAAAATGAT
TTTTAAGCTACCCAGGGATAGGGACCCATATTTTCTTAATGTGGGATTTG
TGGCAAGACCAAGTATCGTTGTATCATTGTACGCGA

Query= MSMg01no424_i06.b1 MSMg01no424_i06.b1 CHROMAT_FILE:
MSMg01no424_i06.b1 PHD_FILE: MSMg01no424_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:29 2005
         (548 letters)



>mm_chr6_137462831_137463778
          Length = 948

 Score = 1029 bits (532), Expect = 0.0
 Identities = 541/544 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctggtttataggaaggcttccagtcatatttatagaattgaatgagtcactggg 64
           ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gaattcctggaacataggaaggcttccagtcatatttatagaattgaatgagtcactggg 689

                                                                       
Query: 65  agtgtctaagagtagaggaatccattcaaacttaggatcttcttgatttattggaataag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 agtgtctaagagtagaggaatccattcaaacttaggatcttcttgatttattggaataag 629

                                                                       
Query: 125 ggatgtgttagaatgaaggtctacatctggagtaattttccagctgtggacgcaaatgta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ggatgtgttagaatgaaggtctacatctggagtaattttccagctgtggacgcaaatgta 569

                                                                       
Query: 185 gttggttttttgtttttgttttcccaatcaataaacttccttgtgaatctcttcttatcc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gttggttttttgtttttgttttcccaatcaataaacttccttgtgaatctcttcttatcc 509

                                                                       
Query: 245 gcccctgctcttttttatttcattagagggcgttttaacactgagggcaaaaccgccacc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gcccctgctcttttttatttcattagagggcgttttaacactgagggcaaaaccgccacc 449

                                                                       
Query: 305 tcctgatgaatttgttgactgtttccagaagtttaaacatggattcaaccttctggtagg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcctgatgaatttgttgactgtttccagaagtttaaacatggattcaaccttctggtagg 389

                                                                       
Query: 365 tgcactttattgatagatactagaagaaacagatggaaaaaaaatcaaagtttagccaag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgcactttattgatagatactagaagaaacagatggaaaaaaaatcaaagtttagccaag 329

                                                                       
Query: 425 tgttcctaaaaaattaaattaagagatagagttgtccctgtggatttgtgggcgtgtgtt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgttcctaaaaaattaaattaagagatagagttgtccctgtggatttgtgggcgtgtgtt 269

                                                                       
Query: 485 ttgattggcctttcatgataacctcagattgaaaggcgtgcatgacaaagagttgtattt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttgattggcctttcatgataacctcagattgaaaggcgtgcatgacaaagagttgtattt 209

               
Query: 545 cttg 548
           ||||
Sbjct: 208 cttg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no424_i06.g1 MSMg01no424_i06.g1 CHROMAT_FILE:
MSMg01no424_i06.g1 PHD_FILE: MSMg01no424_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:29 2005
         (475 letters)



>mm_chr6_137327302_137328176
          Length = 875

 Score =  903 bits (467), Expect = 0.0
 Identities = 473/475 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgtaggattcccactcatttcagcactaaataactaatccaccttgcgtcaacactga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtaggattcccactcatttcagcactaaataactaatccaccttgcgtcaacactga 260

                                                                       
Query: 61  ctactttgtgtacacttttcatattctgttctggcaaggacaccttggtgaccactcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctactttgtgtacacttttcatattctgttctggcaaggacaccttggtgaccactcttt 320

                                                                       
Query: 121 ccaacctggatgttgtcctaactctaagacgagaaagtaaagaccaatgagacagggaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaacctggatgttgtcctaactctaagacgagaaagtaaagaccaatgagacagggaat 380

                                                                       
Query: 181 ctgtcctcagaaatggtgtcaccttacacaaaaggcaacacagaaggcagaatgaggtcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtcctcagaaatggtgtcaccttacacaaaaggcaacacagaaggcagaatgaggtcc 440

                                                                       
Query: 241 atgtcacatgacaacctctgcacaagggacgcagaggtggatttttttttcctcaaaggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtcacatgacaacctctgcacaagggacgcagaggtggatttttttttcctcaaaggt 500

                                                                       
Query: 301 cacagagaaggctctctgaggagctgcttcaggcagagaatgtgcaggctgccttcacga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacagagaaggctctctgaggagctgcttcaggcagagaatgtgcaggctgccttcacga 560

                                                                       
Query: 361 cttgctatctccagagaaaatgtatttctatgacccatagttcctgtgtattcatacctc 420
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttgctatctccagagaaaatgcatttctatgacccatagttcctgtgtattcatacctc 620

                                                                  
Query: 421 tcatttcagagatggtaaatgaattcatacttccatgactagaatctgcatctgt 475
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatttcagagatgggaaatgaattcatacttccatgactagaatctgcatctgt 675


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space:   402225
Effective search space used:   402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)