Query= MSMg01no424_n06.b1 MSMg01no424_n06.b1 CHROMAT_FILE:
MSMg01no424_n06.b1 PHD_FILE: MSMg01no424_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:52 2005
(583 letters)
>mm_chr6_102980815_102981797
Length = 983
Score = 1073 bits (555), Expect = 0.0
Identities = 561/563 (99%)
Strand = Plus / Plus
Query: 21 ctctaccatgtgatcctgtagtttccagttgatggtactctttgctggagaaagtacatc 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ctctaccatgtgatcctgtagtttccagttgatggtactctttgctggagaaagtacatc 280
Query: 81 tcttgaagtgggccttgagatttcaaagctccaagctattcccgatttactccttctggt 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcttgaagtgggccttgagatttcaaagctccaagctattcccgatttactccttctggt 340
Query: 141 tcctacctcccttttatgatatgagccctcaggtggctgctgagagtcactgaccctgcc 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tcctacctcccttttatgatatgagccctcaggtggctgctgagagtcactgaccctgcc 400
Query: 201 ttctgtcacacatacccaccatgatgataatagattcttatctgttgcaattgtaagccc 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttctgtcacacatacccaccatgatgataatagattcttatctgttgcaattgtaagccc 460
Query: 261 aaataagtccttccatctataagctttctttgtcataatgttttaatcatagtgccagaa 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aaataagtccttccatctataagctttctttgtcataatgttttaatcatagtgccagaa 520
Query: 321 aataactaatataataattaattcagaatctacatcatatgatgcttggtattaaaaatt 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aataactaatataataattaattcagaatctacatcatatgatgcttggtattaaaaatt 580
Query: 381 caggtgcacacattgttttggttaggaatatgatttttttaaaaaagacatacagcagaa 440
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 581 caggtgcacacattgttttggttaggaatatgattttttaaaaaaagacatacagcagaa 640
Query: 441 tgtgggaatttgcaagcatgttggtatattgagacggaatcttatcatggttttggttag 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tgtgggaatttgcaagcatgttggtatattgagacggaatcttatcatggttttggttag 700
Query: 501 tatttctgtgattattggctatagtttagcagttttcatatattctattaagaaatggcc 560
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tatttctgtgattattggctatagtttagcagttttcatatattctattaagaaatggct 760
Query: 561 ttggagatgatttgaaattttga 583
|||||||||||||||||||||||
Sbjct: 761 ttggagatgatttgaaattttga 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_n06.g1 MSMg01no424_n06.g1 CHROMAT_FILE:
MSMg01no424_n06.g1 PHD_FILE: MSMg01no424_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:53 2005
(579 letters)
>mm_chr6_103155677_103156655
Length = 979
Score = 1050 bits (543), Expect = 0.0
Identities = 570/583 (97%), Gaps = 8/583 (1%)
Strand = Plus / Minus
Query: 1 atcagtacagtggtcttggcacatctagagaagagacatctttcatgttgctttcttttt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 933 atcagtacagtggtcttggcacatctagagaagagacaactttcatgttgctttcttttt 874
Query: 61 aatttgagcgtattttgttgacaaatcaaaactttctgtattcaacatgaacaacacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 aatttgagcgtattttgttgacaaatcaaaactttctgtattcaacatgaacaacacaat 814
Query: 121 gagttgatccatttgtaagttgtgtgacgattataacaatcacattaattaaaacaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gagttgatccatttgtaagttgtgtgacgattataacaatcacattaattaaaacaacat 754
Query: 181 cacctcccatttaatgcattagctgcagataccacagacactgctagaagaactagagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 cacctcccatttaatgcattagctgcagataccacagacactgctagaagaactagagac 694
Query: 241 ttctttatttaactgagttatttgttgcatgtttaactggttggttcttctaaaacatga 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ttctttaaagaactgagttatttgttgcatgtttaactggttggttcttctaaaacatga 634
Query: 301 acataaagcaaaagaaatgaggaaagtgatatgtggttttattttcccaattattttact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 acataaagcaaaagaaatgaggaaagtgatatgtggttttattttcccaattattttact 574
Query: 361 ttccaattattctttatgtgtcagtatgtataagagaaatgtgggacagaactaggtaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttccaattattctttatgtgtcagtatgtataagagaaatgtgggacagaactaggtaaa 514
Query: 421 tatgcacaaccactttaaataatcacttccccaaatgtcctgcagtaaacattgtgtaca 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tatgcacaaccactttagataatcacttccccaaatgtcctgcagtaaacattgtgtaca 454
Query: 481 ctttgaactacaccaaaagtcattttatgtctgtatgtctatcagaacacatatacaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctttgaactacaccaaaagtcattttatgtctgtatgtctatcagaacacatatacaaac 394
Query: 541 act-------t-tttgttcataatgcctcctaatgggaaaaaa 575
||| | |||||||||||||||||||||||||||||||
Sbjct: 393 actcatagcatatttgttcataatgcctcctaatgggaaaaaa 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
